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The map label for this gene is yddW [H]

Identifier: 113474222

GI number: 113474222

Start: 515297

End: 516334

Strand: Direct

Name: yddW [H]

Synonym: Tery_0336

Alternate gene names: 113474222

Gene position: 515297-516334 (Clockwise)

Preceding gene: 113474220

Following gene: 113474224

Centisome position: 6.65

GC content: 35.74

Gene sequence:

>1038_bases
ATGGAATTACGTGGTATTTGGCTGACAAATGTTGATAGCAAAATTCTCCATTCTAGAGACAAAATTGCTGAAGCAATGAA
TTTTCTTGTTGACACAGGATTTAATGTTATATTTCCTGTTGTCTGGAATAAAGCATTTACTCTCTATCCTAGTCAACTGA
TGGAAACAACTTTCGGACAAGAAATAGACCCCTTATACAAAGGTCGCGACCCTCTCGCAGAAGTCATCATAGAAGCACAA
CGAGTGGGTCTCAAGGTTATTCCCTGGTTTGAATATGGGTTTGTTAGTTCTTATAAACAAAATGGAGGGTTGATCCTGAG
CAAAAAACCGGAATGGATAGCTCGTGAGCGTAAAGGTAATTTACTAGTGAAAAATGGTTTTGAGTGGATGAATGCTTTAG
ATGAAGAGGTGCAAAATTTTTTGATTGATTTGGTTTTGGAAGTTGTGAGAAATTATGATATTGATGGTATTCAGGGAGAT
GATAGAATGCCGGCCTTTCCTTCTGAGGGCGGTTATGATGCAAAAACAGTAGGGCGTTATCGCCAACAATTTTCTTGTCA
TCCACCCCAAAATAATAAAGATCATAAGTGGTTACAATGGCGGGCGAATATTCTGACAGATTTTTTAGCTCGTTTATACG
GAAAAGTGAAAGCAGTTAAACCTAATATTTTGGTCTCAATGGCACCCAGTTTTTATAAGTGGGGTTTCAATGAATATCTA
CAAGACTATCCCACTTGGATAAATAGGGAAGTTGTTGATATTGTTCATCCTCAACTTTATCGTCGTGACTTTTCTAGTTA
TAAGTCTCTTGTAGAACAGTTGGTAAAACAGCAATTTATTGCTACTCATTTAAATAAGATATTTCCGGGAATTTTAATTA
AAATTGGTTCTTATCGTATTAGTATGGATTATTTGTTAGAAGCGATCGCTTATAACCGTTCTGTAGGTATTAATGGAGAA
GTGTTATTTTTCTATGAAGGTCTGCGAGAAAATAATGATGTTTTGGCTAAAGCATTGAGAAAATATGTTTACAATTAA

Upstream 100 bases:

>100_bases
GTCCGTGGCTGATAGCTTAACTATTCTAACATACATAAGTCCTGATGCTGATAATTGAAAGCTTTTCAAAATCAAACTCA
TAAATTTATCTGACATAATT

Downstream 100 bases:

>100_bases
AGTAACCATTCAGCGGTCAGCTATTAGCTACCAGCTACAAGTTATTAACTTATTAGAGTTATTGGGCTTATTTCCAAACA
ACTCTAATGACCATCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MELRGIWLTNVDSKILHSRDKIAEAMNFLVDTGFNVIFPVVWNKAFTLYPSQLMETTFGQEIDPLYKGRDPLAEVIIEAQ
RVGLKVIPWFEYGFVSSYKQNGGLILSKKPEWIARERKGNLLVKNGFEWMNALDEEVQNFLIDLVLEVVRNYDIDGIQGD
DRMPAFPSEGGYDAKTVGRYRQQFSCHPPQNNKDHKWLQWRANILTDFLARLYGKVKAVKPNILVSMAPSFYKWGFNEYL
QDYPTWINREVVDIVHPQLYRRDFSSYKSLVEQLVKQQFIATHLNKIFPGILIKIGSYRISMDYLLEAIAYNRSVGINGE
VLFFYEGLRENNDVLAKALRKYVYN

Sequences:

>Translated_345_residues
MELRGIWLTNVDSKILHSRDKIAEAMNFLVDTGFNVIFPVVWNKAFTLYPSQLMETTFGQEIDPLYKGRDPLAEVIIEAQ
RVGLKVIPWFEYGFVSSYKQNGGLILSKKPEWIARERKGNLLVKNGFEWMNALDEEVQNFLIDLVLEVVRNYDIDGIQGD
DRMPAFPSEGGYDAKTVGRYRQQFSCHPPQNNKDHKWLQWRANILTDFLARLYGKVKAVKPNILVSMAPSFYKWGFNEYL
QDYPTWINREVVDIVHPQLYRRDFSSYKSLVEQLVKQQFIATHLNKIFPGILIKIGSYRISMDYLLEAIAYNRSVGINGE
VLFFYEGLRENNDVLAKALRKYVYN
>Mature_345_residues
MELRGIWLTNVDSKILHSRDKIAEAMNFLVDTGFNVIFPVVWNKAFTLYPSQLMETTFGQEIDPLYKGRDPLAEVIIEAQ
RVGLKVIPWFEYGFVSSYKQNGGLILSKKPEWIARERKGNLLVKNGFEWMNALDEEVQNFLIDLVLEVVRNYDIDGIQGD
DRMPAFPSEGGYDAKTVGRYRQQFSCHPPQNNKDHKWLQWRANILTDFLARLYGKVKAVKPNILVSMAPSFYKWGFNEYL
QDYPTWINREVVDIVHPQLYRRDFSSYKSLVEQLVKQQFIATHLNKIFPGILIKIGSYRISMDYLLEAIAYNRSVGINGE
VLFFYEGLRENNDVLAKALRKYVYN

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=302, Percent_Identity=22.8476821192053, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 40192; Mature: 40192

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRGIWLTNVDSKILHSRDKIAEAMNFLVDTGFNVIFPVVWNKAFTLYPSQLMETTFGQ
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHCCC
EIDPLYKGRDPLAEVIIEAQRVGLKVIPWFEYGFVSSYKQNGGLILSKKPEWIARERKGN
CCCHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC
LLVKNGFEWMNALDEEVQNFLIDLVLEVVRNYDIDGIQGDDRMPAFPSEGGYDAKTVGRY
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RQQFSCHPPQNNKDHKWLQWRANILTDFLARLYGKVKAVKPNILVSMAPSFYKWGFNEYL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHH
QDYPTWINREVVDIVHPQLYRRDFSSYKSLVEQLVKQQFIATHLNKIFPGILIKIGSYRI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE
SMDYLLEAIAYNRSVGINGEVLFFYEGLRENNDVLAKALRKYVYN
EHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MELRGIWLTNVDSKILHSRDKIAEAMNFLVDTGFNVIFPVVWNKAFTLYPSQLMETTFGQ
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHCCC
EIDPLYKGRDPLAEVIIEAQRVGLKVIPWFEYGFVSSYKQNGGLILSKKPEWIARERKGN
CCCHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCC
LLVKNGFEWMNALDEEVQNFLIDLVLEVVRNYDIDGIQGDDRMPAFPSEGGYDAKTVGRY
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RQQFSCHPPQNNKDHKWLQWRANILTDFLARLYGKVKAVKPNILVSMAPSFYKWGFNEYL
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHH
QDYPTWINREVVDIVHPQLYRRDFSSYKSLVEQLVKQQFIATHLNKIFPGILIKIGSYRI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEE
SMDYLLEAIAYNRSVGINGEVLFFYEGLRENNDVLAKALRKYVYN
EHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]