Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yeiH [C]

Identifier: 113474220

GI number: 113474220

Start: 510841

End: 512151

Strand: Direct

Name: yeiH [C]

Synonym: Tery_0334

Alternate gene names: 113474220

Gene position: 510841-512151 (Clockwise)

Preceding gene: 113474219

Following gene: 113474222

Centisome position: 6.59

GC content: 39.89

Gene sequence:

>1311_bases
ATGAGTAAAACAAAATGGTCTGATTTATACAAATTAGAAGACTGGTGGGCAGTCTGGATCGGTTTGTTACTGTTAGCAAG
TGTATTTAGTGGATGGGTAACACTTGTACCCAAAATTCCTAAATGGAAAGGAATAGATATTCTGGCTGCACTCCCGATAG
ATTTAATTCCTAGCTTAGTATTATTAGCGATCGCTCTGTGCGCTGTATTTACATTTGGCAACATTTTGATGCAGGGGCGT
AGGGCAAATGCTATGATACCAGGATTTTTGGCCATCTTTATCTTAGCTACTCTCGCTTATGTATTGGGAAATTCTCAAGC
TGCAAAAGCAATAAATCTCGGTTATGCCTTCTGGGCACTACTAATAGGATTATTAATTAGTAATACAGTAGGTACGCCAG
AATGGTTGAAACCTGCCGTGCGCACCGAATACTATATTAAAACTGGGTTAGTCATTTTGGGAGCAGAAATTCTGTTTAGT
CGCATTGTCGAATTCGGACCCTATGGTTTAGCGATAGCCTGGGGAGTCACGCCAATAGTAGTGATATTCATGTATTTATT
TGGCACTCGCATCCTGAAAATGCAGCAAAAAACATTAGTAATGATAGTAGCAACTTCAACCTCTGTCTGTGGAGTCTCGG
CAGCTATTGCAGCTGCAGCAGCTTGTCGCGCAAAAAAGGATGAGTTAACTTTGGCCGTCGGAATGACTCTGATATTTACA
GTCATAATGATGGTTTTCATGCCCTTGTTTGTCAAAGCTGTCAACATGAATGAATTAGTGGGAGGAGCCTGGTTAGGTGG
CACCATTGATGCTACTGGCGCTGTTGTTGCAGCAGGCGAAGCATTGGGGGATGTGGCCGGAAAAGCGGCAGCTTTAGTAA
AAATGATTCAAAATATGTTGATCGGAGCGATCGCTTTTGCCATAGCAATTTTTTGGGTTACATCTGTGGAAAAGCAACCA
GGATCTTCTACTCCTACTTTAAATGAATTATGGGTGCGTTTTCCTAAGTTTGTTTTAGGTTTTATTGTAGCATCTTTATT
AGTTTCTTTTGTATTTTTACCCGTTATAGGTTTGAATAATGTTCAAGCTTTATTGAAGCAGACTAAAAATTATCGTGGTT
GGCTATTTTGTATGGCGTTTATCTCAATTGGGTTAGAGTCTAATTTTCAAATTTTAGCCCAACAAATGCGAGGCGGTAAA
CCGATGATTTTGTATATTGTAGGGCAAAGTTTTAATATATTGCTAACTTTGGCTGTGGTGTGGTTAATGTTAAGTGGAAA
CTTCTTTCCAGTTCCAGAATTAGGAGGGTAG

Upstream 100 bases:

>100_bases
TTATTCAGCGATCGCCCATAGATAGATAAAAAAAATATAGAGAAAACCCCCGAACTTATCTCAATTGAAATAAAATAAAT
ATTTATTTTCAATTAATTCT

Downstream 100 bases:

>100_bases
ATAGTCCTACTCCCGTAATCGTTTTTGAATAAAACAGGGAGTAGAGTAATGGGATGATGGGGAATATTTTTCGCGGTTTG
GGATCCTGTATATTGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSKTKWSDLYKLEDWWAVWIGLLLLASVFSGWVTLVPKIPKWKGIDILAALPIDLIPSLVLLAIALCAVFTFGNILMQGR
RANAMIPGFLAIFILATLAYVLGNSQAAKAINLGYAFWALLIGLLISNTVGTPEWLKPAVRTEYYIKTGLVILGAEILFS
RIVEFGPYGLAIAWGVTPIVVIFMYLFGTRILKMQQKTLVMIVATSTSVCGVSAAIAAAAACRAKKDELTLAVGMTLIFT
VIMMVFMPLFVKAVNMNELVGGAWLGGTIDATGAVVAAGEALGDVAGKAAALVKMIQNMLIGAIAFAIAIFWVTSVEKQP
GSSTPTLNELWVRFPKFVLGFIVASLLVSFVFLPVIGLNNVQALLKQTKNYRGWLFCMAFISIGLESNFQILAQQMRGGK
PMILYIVGQSFNILLTLAVVWLMLSGNFFPVPELGG

Sequences:

>Translated_436_residues
MSKTKWSDLYKLEDWWAVWIGLLLLASVFSGWVTLVPKIPKWKGIDILAALPIDLIPSLVLLAIALCAVFTFGNILMQGR
RANAMIPGFLAIFILATLAYVLGNSQAAKAINLGYAFWALLIGLLISNTVGTPEWLKPAVRTEYYIKTGLVILGAEILFS
RIVEFGPYGLAIAWGVTPIVVIFMYLFGTRILKMQQKTLVMIVATSTSVCGVSAAIAAAAACRAKKDELTLAVGMTLIFT
VIMMVFMPLFVKAVNMNELVGGAWLGGTIDATGAVVAAGEALGDVAGKAAALVKMIQNMLIGAIAFAIAIFWVTSVEKQP
GSSTPTLNELWVRFPKFVLGFIVASLLVSFVFLPVIGLNNVQALLKQTKNYRGWLFCMAFISIGLESNFQILAQQMRGGK
PMILYIVGQSFNILLTLAVVWLMLSGNFFPVPELGG
>Mature_435_residues
SKTKWSDLYKLEDWWAVWIGLLLLASVFSGWVTLVPKIPKWKGIDILAALPIDLIPSLVLLAIALCAVFTFGNILMQGRR
ANAMIPGFLAIFILATLAYVLGNSQAAKAINLGYAFWALLIGLLISNTVGTPEWLKPAVRTEYYIKTGLVILGAEILFSR
IVEFGPYGLAIAWGVTPIVVIFMYLFGTRILKMQQKTLVMIVATSTSVCGVSAAIAAAAACRAKKDELTLAVGMTLIFTV
IMMVFMPLFVKAVNMNELVGGAWLGGTIDATGAVVAAGEALGDVAGKAAALVKMIQNMLIGAIAFAIAIFWVTSVEKQPG
SSTPTLNELWVRFPKFVLGFIVASLLVSFVFLPVIGLNNVQALLKQTKNYRGWLFCMAFISIGLESNFQILAQQMRGGKP
MILYIVGQSFNILLTLAVVWLMLSGNFFPVPELGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=295, Percent_Identity=23.728813559322, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 47156; Mature: 47025

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTKWSDLYKLEDWWAVWIGLLLLASVFSGWVTLVPKIPKWKGIDILAALPIDLIPSLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHH
LLAIALCAVFTFGNILMQGRRANAMIPGFLAIFILATLAYVLGNSQAAKAINLGYAFWAL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIGLLISNTVGTPEWLKPAVRTEYYIKTGLVILGAEILFSRIVEFGPYGLAIAWGVTPIV
HHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VIFMYLFGTRILKMQQKTLVMIVATSTSVCGVSAAIAAAAACRAKKDELTLAVGMTLIFT
HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VIMMVFMPLFVKAVNMNELVGGAWLGGTIDATGAVVAAGEALGDVAGKAAALVKMIQNML
HHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGAIAFAIAIFWVTSVEKQPGSSTPTLNELWVRFPKFVLGFIVASLLVSFVFLPVIGLNN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VQALLKQTKNYRGWLFCMAFISIGLESNFQILAQQMRGGKPMILYIVGQSFNILLTLAVV
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
WLMLSGNFFPVPELGG
HHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKTKWSDLYKLEDWWAVWIGLLLLASVFSGWVTLVPKIPKWKGIDILAALPIDLIPSLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHH
LLAIALCAVFTFGNILMQGRRANAMIPGFLAIFILATLAYVLGNSQAAKAINLGYAFWAL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIGLLISNTVGTPEWLKPAVRTEYYIKTGLVILGAEILFSRIVEFGPYGLAIAWGVTPIV
HHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VIFMYLFGTRILKMQQKTLVMIVATSTSVCGVSAAIAAAAACRAKKDELTLAVGMTLIFT
HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VIMMVFMPLFVKAVNMNELVGGAWLGGTIDATGAVVAAGEALGDVAGKAAALVKMIQNML
HHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGAIAFAIAIFWVTSVEKQPGSSTPTLNELWVRFPKFVLGFIVASLLVSFVFLPVIGLNN
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VQALLKQTKNYRGWLFCMAFISIGLESNFQILAQQMRGGKPMILYIVGQSFNILLTLAVV
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
WLMLSGNFFPVPELGG
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12835416 [H]