| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is engA
Identifier: 113474219
GI number: 113474219
Start: 509153
End: 510514
Strand: Direct
Name: engA
Synonym: Tery_0333
Alternate gene names: 113474219
Gene position: 509153-510514 (Clockwise)
Preceding gene: 113474216
Following gene: 113474220
Centisome position: 6.57
GC content: 37.15
Gene sequence:
>1362_bases ATGCCCTTACCTATTGTAGCTATTATTGGCAGGCCAAATGTGGGGAAGTCCACAATAGTCAATCGCTTGGCTGAAAGTAA AGACGCCATCGTCCACGATGAACCAGGAATAACTCGCGATCGCACCTATCGAAATGCATACTGGGAAGACCGGGAGTTTC AAGTTGTAGATACAGGAGGTTTAGTATTTGATGACAATACAGAATTTTTACCCCTAATCCGCGAACAAGCTATGGCAGCT CTAGTAGAAGCAAGTGTAGCAATTTTTGTGGTAGATGGACAAACAGGTCTTACTGGAGGAGATGAAGAAATTGCCCAATG GCTCCGTCAACAAACTATTCCGATCCTCCTAGCAGTTAATAAATGCGAATCTATAACAGAAGGATTGACCCAAGCTGCTA TGTTTTGGGAATTAGGTTTAGGAGAACCTTATCCTATTTCTGGTATTCATGGCAATGGTACTGGAGAATTATTAGACGAT TTAATTACCTACTTACCAACCCAAGGAGAAATTACTGAAACTAATCAAACTAAAATAGCAATTGTTGGTCGTCCAAACGT TGGTAAATCAAGTTTATTAAATTCATTTATTGGAGAAAAACGTGCAATTGTTAGTCCTATTTCTGGTACAACAAGAGATG CTATTGATACTGTAGTAGAACGAAATGGCAAAACTTATCGTTTGATTGATACTGCTGGAATTAGAAAGAAAAAAAATGTC GAATATGGTGCCGAATTTTTTGGGATTAACCGAGCTTTTAAAGCTATTCGTCGTGCTGAAGTTGTTATGTTTGTAATTGA TGCTTTAGATGGAGTAACAGAACAAGACCAAAAACTAGCAAATCGGATCATAGAAGACGGTAGAGCTTGTGTTATTGTAG TGAATAAATGGGATGCCATAGAAAAAGATAATTATACTATTTATACTTATGAACAGGAAGTAAGGTCGCGACTATATTTT GTGGAATGGGCAGAGATGATTTTTGTTAGTGCACTAACTGGAAAACGAGTGGAGAAAATTATAAATTTGATAGATAATGC AGCCAATGAATATCAGCGTCGAGTGACAACTTCTGTAATCAATGAGGTATTAGAAGAAGCAATTAGTTGGAATTCTCCCC CCACTAATCGTCAAGGTCGTCAAGGTAAAATTTATTATGGAACTCAAGTAACAAGTAAACCACCAACAATTGCATTATTT GTCAACGATCCTAAACGTTTTCCTGAAAATTATCGGCGTTATATTCAAAGTCAATTTCGTCAACATTTAGGATTTACAGG TACACCAATAAGATTACTTTGGCGTGGTAAAAAAGCTAGAGAAGTAGAACAAAATACTGTTAATAGAGCAACTCGTGTCT AA
Upstream 100 bases:
>100_bases GGTGGGGATGCTCAGATTTTTGATTGGTTAAAACTCTTAAATTATTGCTATAATTAAAAATTGAATATTTTTGATTTACC TAAACTAATTAAAATTAACT
Downstream 100 bases:
>100_bases TATGTTATCTGCAAATTAAATATATTGATAGCACTACAGGCAACTCAAAAATCAAATCCCCCTTACTCCCTAAAGGTTAT TCATGATTACGAACTCCTAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGLVFDDNTEFLPLIREQAMAA LVEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDD LITYLPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNV EYGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAIEKDNYTIYTYEQEVRSRLYF VEWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALF VNDPKRFPENYRRYIQSQFRQHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV
Sequences:
>Translated_453_residues MPLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGLVFDDNTEFLPLIREQAMAA LVEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDD LITYLPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNV EYGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAIEKDNYTIYTYEQEVRSRLYF VEWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALF VNDPKRFPENYRRYIQSQFRQHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV >Mature_452_residues PLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGLVFDDNTEFLPLIREQAMAAL VEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDDL ITYLPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNVE YGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAIEKDNYTIYTYEQEVRSRLYFV EWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVINEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALFV NDPKRFPENYRRYIQSQFRQHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=480, Percent_Identity=38.9583333333333, Blast_Score=312, Evalue=3e-86, Organism=Escherichia coli, GI2367268, Length=90, Percent_Identity=44.4444444444444, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1788919, Length=122, Percent_Identity=35.2459016393443, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17507259, Length=89, Percent_Identity=49.438202247191, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323665, Length=155, Percent_Identity=36.1290322580645, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_TRIEI (Q119L7)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720280.1 - ProteinModelPortal: Q119L7 - SMR: Q119L7 - STRING: Q119L7 - GeneID: 4243148 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0333 - NMPDR: fig|203124.1.peg.2476 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q119L7 - ProtClustDB: PRK00093 - BioCyc: TERY203124:TERY_0333-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 51020; Mature: 50888
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGG CCCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCEEEEECCC LVFDDNTEFLPLIREQAMAALVEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVN EEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEH KCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDDLITYLPTQGEITETNQTKIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEE IVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNV EEECCCCCHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC EYGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC EKDNYTIYTYEQEVRSRLYFVEWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVI CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALFVNDPKRFPENYRRYIQSQFR HHHHHHHHCCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCHHHCCHHHHHHHHHHHH QHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PLPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGG CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCEEEEECCC LVFDDNTEFLPLIREQAMAALVEASVAIFVVDGQTGLTGGDEEIAQWLRQQTIPILLAVN EEECCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEH KCESITEGLTQAAMFWELGLGEPYPISGIHGNGTGELLDDLITYLPTQGEITETNQTKIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEE IVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTYRLIDTAGIRKKKNV EEECCCCCHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC EYGAEFFGINRAFKAIRRAEVVMFVIDALDGVTEQDQKLANRIIEDGRACVIVVNKWDAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC EKDNYTIYTYEQEVRSRLYFVEWAEMIFVSALTGKRVEKIINLIDNAANEYQRRVTTSVI CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEVLEEAISWNSPPTNRQGRQGKIYYGTQVTSKPPTIALFVNDPKRFPENYRRYIQSQFR HHHHHHHHCCCCCCCCCCCCCCEEEECCEECCCCCEEEEEECCHHHCCHHHHHHHHHHHH QHLGFTGTPIRLLWRGKKAREVEQNTVNRATRV HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA