| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is pgsA [H]
Identifier: 113474189
GI number: 113474189
Start: 456754
End: 457272
Strand: Direct
Name: pgsA [H]
Synonym: Tery_0298
Alternate gene names: 113474189
Gene position: 456754-457272 (Clockwise)
Preceding gene: 113474187
Following gene: 113474190
Centisome position: 5.89
GC content: 31.98
Gene sequence:
>519_bases ATGAATATACCTAACTCAATTACTTTTTCTCGTCTTTTGGGAATACCTATTATTCTTTACACTCTCAAAACTCCAACTAA TCAAAATCTTTGGATATCTTTAGTGATATTTTTAATGGCTTCAGCTACAGATTTTTTAGACGGTTATTTAGCACGAAAAC TCAACCAAGTGACTGACTTAGGTAAATTTTTAGATCCTTTAGTAGATAAATTATTAATTTTAGCACCTCTATTAGCATTA ATTGAATTAGGCAAAGTTCCGGCCTGGGGAGTATTTTTAATTTTAAGTCGGGAGTTAACTATAGCTGGTTGGCGTGTTAA TCAAAGCAAAGTTTCAGGAGCTAATATTTGGGGAAAATTAAAAACTGTAAGTCAAATTATCGCTGTTGCTCTATTAATTG CTCCTTTGCCTAAAACTTGGGCAACTTCAACAATAATTATATTTTGGGTTTCTGTTGCTTTAACGATCATTTCAGGGATA GTTTACTTATTACCTACTCAAGAAACTAGCAATACATAA
Upstream 100 bases:
>100_bases TTCATTAGTTTTTTTACCCTGCTTTGTACTCTCTTTTTTCCAGAGATGTCTATTATTATATAATAATATTTACTTCTTTT TCCTGATTTTTTATTCAATT
Downstream 100 bases:
>100_bases TACCATTTATTAAAAAAAAATTTTACTTGGCTATTGACCTGGATAGGAAATTTGTAGACAACATTCTTACTGTCAAAGGA GTAATTTATACGCTTCTAGT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNIPNSITFSRLLGIPIILYTLKTPTNQNLWISLVIFLMASATDFLDGYLARKLNQVTDLGKFLDPLVDKLLILAPLLAL IELGKVPAWGVFLILSRELTIAGWRVNQSKVSGANIWGKLKTVSQIIAVALLIAPLPKTWATSTIIIFWVSVALTIISGI VYLLPTQETSNT
Sequences:
>Translated_172_residues MNIPNSITFSRLLGIPIILYTLKTPTNQNLWISLVIFLMASATDFLDGYLARKLNQVTDLGKFLDPLVDKLLILAPLLAL IELGKVPAWGVFLILSRELTIAGWRVNQSKVSGANIWGKLKTVSQIIAVALLIAPLPKTWATSTIIIFWVSVALTIISGI VYLLPTQETSNT >Mature_172_residues MNIPNSITFSRLLGIPIILYTLKTPTNQNLWISLVIFLMASATDFLDGYLARKLNQVTDLGKFLDPLVDKLLILAPLLAL IELGKVPAWGVFLILSRELTIAGWRVNQSKVSGANIWGKLKTVSQIIAVALLIAPLPKTWATSTIIIFWVSVALTIISGI VYLLPTQETSNT
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=173, Percent_Identity=33.5260115606936, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 18899; Mature: 18899
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPNSITFSRLLGIPIILYTLKTPTNQNLWISLVIFLMASATDFLDGYLARKLNQVTDL CCCCCHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKFLDPLVDKLLILAPLLALIELGKVPAWGVFLILSRELTIAGWRVNQSKVSGANIWGKL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCHHHCCCHHHHHHH KTVSQIIAVALLIAPLPKTWATSTIIIFWVSVALTIISGIVYLLPTQETSNT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC >Mature Secondary Structure MNIPNSITFSRLLGIPIILYTLKTPTNQNLWISLVIFLMASATDFLDGYLARKLNQVTDL CCCCCHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKFLDPLVDKLLILAPLLALIELGKVPAWGVFLILSRELTIAGWRVNQSKVSGANIWGKL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCHHHCCCHHHHHHH KTVSQIIAVALLIAPLPKTWATSTIIIFWVSVALTIISGIVYLLPTQETSNT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]