| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474142
Identifier: 113474142
GI number: 113474142
Start: 382366
End: 383226
Strand: Direct
Name: 113474142
Synonym: Tery_0244
Alternate gene names: NA
Gene position: 382366-383226 (Clockwise)
Preceding gene: 113474138
Following gene: 113474143
Centisome position: 4.93
GC content: 37.4
Gene sequence:
>861_bases ATGTTTAACTCTACTGAACTTTTGATTGATGCTTTCATACAACGGCTGATAAGTGGCTATAGTCATACTTATGGTGGATA TAAGCCAGATTATTCTGATATTATCGCCTGGGCAGCTGGAATGGCATTGGAAAATATTGCTAACAGTGATGCTCTTTATC ACAATGTGGAACATACGGTTCTTGTAACTTTAGTGGGACAAGAAATTTTACGAGGGAAGCATATCCGTGAGGGAGGGGTA TCTTGTGAAGATTGGTTACATTACCACATTTCTTTACTTTGTCACGATATTGGGTATGTCAAAGGTGTATGCCGTCAAGA TCGAGAGGATTTAAGGTTGTATGCTACGGGAGTAGATAATATGAAGGTGTCTTTACCAAGAGGTGCTACAGATGCTAGTC TTACTCCCTATCATGTTGATCGAGGTAAGCTATTTATTGATGAACGTTTTGGAGGTCATAAGTTAATTGAGGCAGAAATG ATTAAGCATAACATGGAACTGACTCGTTTCCCAGTACCAGCAGATAAGGATCATCAAGATAAGAATAACTATCCTGGTTT AGTGAGGGCTGCAGATTTAATTGGTCAGTTGAGTGACCCCCGCTATTTACAAAAAATTAGTGCCTTGTTTTATGAGTTTG AGGAAACAGGTCAAAATAAAGTACTAGGATATAATAATCCTGGGGATCTACGTCAGGGTTATCCTAAGTTTTATTGGAAT GTAGTTTATAGTTACGTTAAAGATGCGATCGGTTATTTGAATTTGACTCAACAGGGAAAACAAATTATAGCTAATCTAAA TGCTAATGTATTTAGAGTCGAACATGATAATTCTTTACCGGAGATAGCATTTATCAGGTAA
Upstream 100 bases:
>100_bases ATCAAATATCAAAAAATGAGCTTAGACTATCTGTTTATTATAGTAAATAAGAATAAGTATAAGTTGACAAAAACAGTAAA TTCAAACTAGGAGACTGCAG
Downstream 100 bases:
>100_bases ATAGGCTCTTGAAACAATTTAGGCAGTTGTTAGTAGGGAAACTGGGTTTATATATCTGCTAAGGATGGGAAACCCGGTTT TTTTCATGATCAGGACTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MFNSTELLIDAFIQRLISGYSHTYGGYKPDYSDIIAWAAGMALENIANSDALYHNVEHTVLVTLVGQEILRGKHIREGGV SCEDWLHYHISLLCHDIGYVKGVCRQDREDLRLYATGVDNMKVSLPRGATDASLTPYHVDRGKLFIDERFGGHKLIEAEM IKHNMELTRFPVPADKDHQDKNNYPGLVRAADLIGQLSDPRYLQKISALFYEFEETGQNKVLGYNNPGDLRQGYPKFYWN VVYSYVKDAIGYLNLTQQGKQIIANLNANVFRVEHDNSLPEIAFIR
Sequences:
>Translated_286_residues MFNSTELLIDAFIQRLISGYSHTYGGYKPDYSDIIAWAAGMALENIANSDALYHNVEHTVLVTLVGQEILRGKHIREGGV SCEDWLHYHISLLCHDIGYVKGVCRQDREDLRLYATGVDNMKVSLPRGATDASLTPYHVDRGKLFIDERFGGHKLIEAEM IKHNMELTRFPVPADKDHQDKNNYPGLVRAADLIGQLSDPRYLQKISALFYEFEETGQNKVLGYNNPGDLRQGYPKFYWN VVYSYVKDAIGYLNLTQQGKQIIANLNANVFRVEHDNSLPEIAFIR >Mature_286_residues MFNSTELLIDAFIQRLISGYSHTYGGYKPDYSDIIAWAAGMALENIANSDALYHNVEHTVLVTLVGQEILRGKHIREGGV SCEDWLHYHISLLCHDIGYVKGVCRQDREDLRLYATGVDNMKVSLPRGATDASLTPYHVDRGKLFIDERFGGHKLIEAEM IKHNMELTRFPVPADKDHQDKNNYPGLVRAADLIGQLSDPRYLQKISALFYEFEETGQNKVLGYNNPGDLRQGYPKFYWN VVYSYVKDAIGYLNLTQQGKQIIANLNANVFRVEHDNSLPEIAFIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32557; Mature: 32557
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNSTELLIDAFIQRLISGYSHTYGGYKPDYSDIIAWAAGMALENIANSDALYHNVEHTV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH LVTLVGQEILRGKHIREGGVSCEDWLHYHISLLCHDIGYVKGVCRQDREDLRLYATGVDN HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECCCC MKVSLPRGATDASLTPYHVDRGKLFIDERFGGHKLIEAEMIKHNMELTRFPVPADKDHQD EEEECCCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCC KNNYPGLVRAADLIGQLSDPRYLQKISALFYEFEETGQNKVLGYNNPGDLRQGYPKFYWN CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCHHHHHH VVYSYVKDAIGYLNLTQQGKQIIANLNANVFRVEHDNSLPEIAFIR HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEC >Mature Secondary Structure MFNSTELLIDAFIQRLISGYSHTYGGYKPDYSDIIAWAAGMALENIANSDALYHNVEHTV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHH LVTLVGQEILRGKHIREGGVSCEDWLHYHISLLCHDIGYVKGVCRQDREDLRLYATGVDN HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECCCC MKVSLPRGATDASLTPYHVDRGKLFIDERFGGHKLIEAEMIKHNMELTRFPVPADKDHQD EEEECCCCCCCCCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCC KNNYPGLVRAADLIGQLSDPRYLQKISALFYEFEETGQNKVLGYNNPGDLRQGYPKFYWN CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCHHHHHH VVYSYVKDAIGYLNLTQQGKQIIANLNANVFRVEHDNSLPEIAFIR HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA