| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474130
Identifier: 113474130
GI number: 113474130
Start: 358803
End: 359048
Strand: Direct
Name: 113474130
Synonym: Tery_0230
Alternate gene names: NA
Gene position: 358803-359048 (Clockwise)
Preceding gene: 113474129
Following gene: 113474132
Centisome position: 4.63
GC content: 23.58
Gene sequence:
>246_bases ATGAAATTTAATGTAATAAATCAGAAGAATTTACCATTTAAAACTGTATTAATAGATAGTTGTTATGCAACACAAAGATT AATAGCATTAATAGATAATATGCGAAAAATTTATTATTGCTCTGAAAAATTAATCCAGAGCATAGATGATACTTGTGGTG CAGAAAAATTTGCTACATTAAGTTGGAATGAATCAGAAAGAAAATCAGGTAAAATAATAAAAATTAAAGGAATTATTTTG AGATAA
Upstream 100 bases:
>100_bases TATATATTTGAACCCCAAAAATGAACAATTTTTAGTATTAAATTACCGCATATATAATCCAGATAGTAACAAAAAAACTA AAATACACCATGTTAAAGAG
Downstream 100 bases:
>100_bases AAAAATCAATCTATTCTGGGCTACTATTTCTGCCAAGAGGACAGAATACATTGTCACTAATGACTTAAGTCAATCTTCTA CAGATGATGTAGAATTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL R
Sequences:
>Translated_81_residues MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL R >Mature_81_residues MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATLSWNESERKSGKIIKIKGIIL R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9373; Mature: 9373
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SWNESERKSGKIIKIKGIILR CCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKFNVINQKNLPFKTVLIDSCYATQRLIALIDNMRKIYYCSEKLIQSIDDTCGAEKFATL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE SWNESERKSGKIIKIKGIILR CCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA