| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835471
Identifier: 110835471
GI number: 110835471
Start: 2953471
End: 2953797
Strand: Reverse
Name: 110835471
Synonym: ABO_2610
Alternate gene names: NA
Gene position: 2953797-2953471 (Counterclockwise)
Preceding gene: 110835473
Following gene: 110835469
Centisome position: 94.67
GC content: 57.8
Gene sequence:
>327_bases ATGCTCAATACCTTTCTGCAGTTTTACGTTGATCACCAGTGGCTAGCGTTACCGCTGGCGATGTTGTCGGCGGTGGGGGT AGGGATCCTTTGGATGGGCTGGCTCACCCTGATGCTGACCGCTTTTGGTCAGCGGCTGTGGTTATGGGGTTTTGCCATTC TTTTGCTGCCAGTGCCGGCCTCCCAATGTTTCGCACTGCGCCACCCAACGATGAACCCCTGGGCAAACCGCTTAGTAATG TGGGGGTTGTTGATATCGCTGCCCATGCTGGTGTTGACCGGCTGGTGGGCCTGGGTGGCACTGACGCAGCCCTCACCGGT TCCGTAA
Upstream 100 bases:
>100_bases GGTGGAACCAGTCAACGGGTGACAAGCGTTGACTGGTTGCCCGTGAGGAGGACAATGCACTCAGGCCATTTCCGCTCTTA ACAGACTAAGATGATCGACC
Downstream 100 bases:
>100_bases TCATGTCGCGTTGTCGTGTAGCCAGTGCGTGGGTTTGTCTGGTTTGGCATAGCTGAGCCGCCCGATGGATTGGCTGCGGT GGTAGCTATCGAGCCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLNTFLQFYVDHQWLALPLAMLSAVGVGILWMGWLTLMLTAFGQRLWLWGFAILLLPVPASQCFALRHPTMNPWANRLVM WGLLISLPMLVLTGWWAWVALTQPSPVP
Sequences:
>Translated_108_residues MLNTFLQFYVDHQWLALPLAMLSAVGVGILWMGWLTLMLTAFGQRLWLWGFAILLLPVPASQCFALRHPTMNPWANRLVM WGLLISLPMLVLTGWWAWVALTQPSPVP >Mature_108_residues MLNTFLQFYVDHQWLALPLAMLSAVGVGILWMGWLTLMLTAFGQRLWLWGFAILLLPVPASQCFALRHPTMNPWANRLVM WGLLISLPMLVLTGWWAWVALTQPSPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12316; Mature: 12316
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTFLQFYVDHQWLALPLAMLSAVGVGILWMGWLTLMLTAFGQRLWLWGFAILLLPVPA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SQCFALRHPTMNPWANRLVMWGLLISLPMLVLTGWWAWVALTQPSPVP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MLNTFLQFYVDHQWLALPLAMLSAVGVGILWMGWLTLMLTAFGQRLWLWGFAILLLPVPA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH SQCFALRHPTMNPWANRLVMWGLLISLPMLVLTGWWAWVALTQPSPVP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA