| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is fda [H]
Identifier: 110835473
GI number: 110835473
Start: 2954511
End: 2955575
Strand: Reverse
Name: fda [H]
Synonym: ABO_2612
Alternate gene names: 110835473
Gene position: 2955575-2954511 (Counterclockwise)
Preceding gene: 110835474
Following gene: 110835471
Centisome position: 94.73
GC content: 53.9
Gene sequence:
>1065_bases ATGGCACTAGTAAGCATGCGACAGCTGCTGGACCACGCTGCCGAGTTCGGCTACGGCGTACCGGCTTATAATGTGAACAA TGTGGAACAAATGCGCGCCATTATGGAAGCCGCGGACAAAACCAACTCCCCGGTGATCGTGCAGGCGTCTGCTGGAGCCC GCAAATATGCAGGTGCGCCTTTCTTGCGTCATCTGATTCTGGCGGCCACCGAAGAGTTTCCACATATTCCTGTCGTTATG CATCAGGACCATGGCACCAGCCCGTCTGTTTGCCAGCGCTCTATTCAGCTGGGCTTCTCCTCGGTGATGATGGATGGGTC CTTGGGTGAAGATGGCAAAACCCCCACCGATTACGAGTACAACGTGGAGGTAACTCGCCGCACTGTGGACATGGCGCATG CTTGTGGTGTGTCTGTTGAGGGTGAGCTGGGTTGTCTGGGTTCTTTGGAAACCGGTGAAGCCGGTGAAGAAGACGGTATT GGTGCGGCCGGCAAGCTAACCCACGAGCAGATGCTGACCGACCCTGAAGAAGCGGCTGACTTTGTGCAGAAAACCAAAGT GGATGCCCTGGCGATTGCTATCGGTACCAGCCACGGGGCCTATAAATTCACTCGCCCACCCACCGGGGATATTCTGGCCA TCGAGCAGATTAAAGCGATCCATAAACGCATTCCGGATACCCACTTGGTGATGCACGGCTCTTCTTCCGTGCCGCAGGAC TGGTTGGCGATCATTAATGAATTTGGTGGTGAAATTCCGGAAACCTACGGTGTGCCGGTGGAAGAAATTCAGGAAGGCAT CAAGCACGGTGTGCGTAAGGTCAACATCGATACCGACTTGCGGTTGGCGTCCACCGGGGCAATCCGTCGCTTCCTGGCCC AGAACCCAGCCGAGTTTGATCCACGTAAATACCTGAAAGAATCCATCACTGCCATGCGAGATATCTGTATGGCCCGTTAT GAAGCTTTTGGTACGGCGGGTTATGCGGACAAGATCAAACCGATCAGCTTAGAAAAGATGTTCCAGCGTTATGAATCCGG TGATTTGGATCCACGGGTTAAATAA
Upstream 100 bases:
>100_bases CAACTCGTACGTTAGGCGTTTGGTTTTTGACATCGGGTTGTAATGGACGAAGCATAGGCGGTGCGCGCGCATCGCAAACG GATAATGAAGGGGAAATACC
Downstream 100 bases:
>100_bases ACGTCGCCGAACGCTTTCGGTTATAGGCCGCACGCGGATCGACAAAAAAACCGCGCCCAACCGGGCGCGGTTTTTTTGTG TATCGCTACATTAGCGAGTG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MALVSMRQLLDHAAEFGYGVPAYNVNNVEQMRAIMEAADKTNSPVIVQASAGARKYAGAPFLRHLILAATEEFPHIPVVM HQDHGTSPSVCQRSIQLGFSSVMMDGSLGEDGKTPTDYEYNVEVTRRTVDMAHACGVSVEGELGCLGSLETGEAGEEDGI GAAGKLTHEQMLTDPEEAADFVQKTKVDALAIAIGTSHGAYKFTRPPTGDILAIEQIKAIHKRIPDTHLVMHGSSSVPQD WLAIINEFGGEIPETYGVPVEEIQEGIKHGVRKVNIDTDLRLASTGAIRRFLAQNPAEFDPRKYLKESITAMRDICMARY EAFGTAGYADKIKPISLEKMFQRYESGDLDPRVK
Sequences:
>Translated_354_residues MALVSMRQLLDHAAEFGYGVPAYNVNNVEQMRAIMEAADKTNSPVIVQASAGARKYAGAPFLRHLILAATEEFPHIPVVM HQDHGTSPSVCQRSIQLGFSSVMMDGSLGEDGKTPTDYEYNVEVTRRTVDMAHACGVSVEGELGCLGSLETGEAGEEDGI GAAGKLTHEQMLTDPEEAADFVQKTKVDALAIAIGTSHGAYKFTRPPTGDILAIEQIKAIHKRIPDTHLVMHGSSSVPQD WLAIINEFGGEIPETYGVPVEEIQEGIKHGVRKVNIDTDLRLASTGAIRRFLAQNPAEFDPRKYLKESITAMRDICMARY EAFGTAGYADKIKPISLEKMFQRYESGDLDPRVK >Mature_353_residues ALVSMRQLLDHAAEFGYGVPAYNVNNVEQMRAIMEAADKTNSPVIVQASAGARKYAGAPFLRHLILAATEEFPHIPVVMH QDHGTSPSVCQRSIQLGFSSVMMDGSLGEDGKTPTDYEYNVEVTRRTVDMAHACGVSVEGELGCLGSLETGEAGEEDGIG AAGKLTHEQMLTDPEEAADFVQKTKVDALAIAIGTSHGAYKFTRPPTGDILAIEQIKAIHKRIPDTHLVMHGSSSVPQDW LAIINEFGGEIPETYGVPVEEIQEGIKHGVRKVNIDTDLRLASTGAIRRFLAQNPAEFDPRKYLKESITAMRDICMARYE AFGTAGYADKIKPISLEKMFQRYESGDLDPRVK
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=327, Percent_Identity=32.4159021406728, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87082041, Length=315, Percent_Identity=32.3809523809524, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788072, Length=329, Percent_Identity=27.355623100304, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38633; Mature: 38502
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVSMRQLLDHAAEFGYGVPAYNVNNVEQMRAIMEAADKTNSPVIVQASAGARKYAGAP CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCH FLRHLILAATEEFPHIPVVMHQDHGTSPSVCQRSIQLGFSSVMMDGSLGEDGKTPTDYEY HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVEVTRRTVDMAHACGVSVEGELGCLGSLETGEAGEEDGIGAAGKLTHEQMLTDPEEAAD EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHH FVQKTKVDALAIAIGTSHGAYKFTRPPTGDILAIEQIKAIHKRIPDTHLVMHGSSSVPQD HHHHHHHCEEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCHH WLAIINEFGGEIPETYGVPVEEIQEGIKHGVRKVNIDTDLRLASTGAIRRFLAQNPAEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKYLKESITAMRDICMARYEAFGTAGYADKIKPISLEKMFQRYESGDLDPRVK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALVSMRQLLDHAAEFGYGVPAYNVNNVEQMRAIMEAADKTNSPVIVQASAGARKYAGAP CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCH FLRHLILAATEEFPHIPVVMHQDHGTSPSVCQRSIQLGFSSVMMDGSLGEDGKTPTDYEY HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE NVEVTRRTVDMAHACGVSVEGELGCLGSLETGEAGEEDGIGAAGKLTHEQMLTDPEEAAD EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHH FVQKTKVDALAIAIGTSHGAYKFTRPPTGDILAIEQIKAIHKRIPDTHLVMHGSSSVPQD HHHHHHHCEEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCHH WLAIINEFGGEIPETYGVPVEEIQEGIKHGVRKVNIDTDLRLASTGAIRRFLAQNPAEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKYLKESITAMRDICMARYEAFGTAGYADKIKPISLEKMFQRYESGDLDPRVK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]