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The map label for this gene is ygfB [C]

Identifier: 110835462

GI number: 110835462

Start: 2945819

End: 2946409

Strand: Reverse

Name: ygfB [C]

Synonym: ABO_2601

Alternate gene names: 110835462

Gene position: 2946409-2945819 (Counterclockwise)

Preceding gene: 110835466

Following gene: 110835461

Centisome position: 94.43

GC content: 59.05

Gene sequence:

>591_bases
ATGTCCAACGATATTGATTTTGAGGTTCTCGTCCAAGGGCTGGCTGCGGCCGGTGTGAAACATTCTCCCAGTGAGCTGCA
GGGCGTAATCGCGGGTCTGCTAGCGACTGGGCACGGTAGCCATAATGAAGAGTTGCTCGGTGTGCTGGCTGCCCATGTGG
ATATGCCCGAGGGTTTTGGCGCCGAAATGAACGGCGCTTTGTTGGCGGTGCGAGACCAGTTGCATGCAGGCTATCAGGGT
ACCGGCCTGGAGCTGACGCTCCTATTGCCGGCGGATGAAGATGACTTGGGCTTGCGAGTGGCTGCGCTTGCCCAGTGGAG
CGAGGGGTTTTTAGTGGGTTTTGGCACCGGTTCAGCCAATACCCACGACAAGGACCTGCTGCCGGGCGTTCAGGAAGCGC
TATCGGATCTGGCCGCCATCAGCCAGGTGGCTACGCCGGATGATAACGGCGACGCGGAAGAAGATATGTATGAGCAGGTG
GCCGAACACTGCCGAATGTCGGCCCTGATGATTTACACTGAATTGGTCATGCGCCATCAGGGCAAGCCGGACTCCGCGCC
AGCGGACAAGGCACCGCCAACCCGTCACTAA

Upstream 100 bases:

>100_bases
AGTATGGTAGCCACTTAGGCTACACTTCTCCGGTAATCTCCAACTCTGCTTCCGGGGCCGCTGTGCCACCGAAGAGCGGC
TGCTGAAAACGGAAAGACGC

Downstream 100 bases:

>100_bases
AGACGCGCCAGCGGACAAGGCACCGCCAACCCGTCACTAAAGAAATATAGGGTGCAGCATGCCTGACGCTACACGTGAAA
ATCGATAAGCGACTCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSNDIDFEVLVQGLAAAGVKHSPSELQGVIAGLLATGHGSHNEELLGVLAAHVDMPEGFGAEMNGALLAVRDQLHAGYQG
TGLELTLLLPADEDDLGLRVAALAQWSEGFLVGFGTGSANTHDKDLLPGVQEALSDLAAISQVATPDDNGDAEEDMYEQV
AEHCRMSALMIYTELVMRHQGKPDSAPADKAPPTRH

Sequences:

>Translated_196_residues
MSNDIDFEVLVQGLAAAGVKHSPSELQGVIAGLLATGHGSHNEELLGVLAAHVDMPEGFGAEMNGALLAVRDQLHAGYQG
TGLELTLLLPADEDDLGLRVAALAQWSEGFLVGFGTGSANTHDKDLLPGVQEALSDLAAISQVATPDDNGDAEEDMYEQV
AEHCRMSALMIYTELVMRHQGKPDSAPADKAPPTRH
>Mature_195_residues
SNDIDFEVLVQGLAAAGVKHSPSELQGVIAGLLATGHGSHNEELLGVLAAHVDMPEGFGAEMNGALLAVRDQLHAGYQGT
GLELTLLLPADEDDLGLRVAALAQWSEGFLVGFGTGSANTHDKDLLPGVQEALSDLAAISQVATPDDNGDAEEDMYEQVA
EHCRMSALMIYTELVMRHQGKPDSAPADKAPPTRH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 20617; Mature: 20486

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDIDFEVLVQGLAAAGVKHSPSELQGVIAGLLATGHGSHNEELLGVLAAHVDMPEGFG
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
AEMNGALLAVRDQLHAGYQGTGLELTLLLPADEDDLGLRVAALAQWSEGFLVGFGTGSAN
CCCCCCEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCC
THDKDLLPGVQEALSDLAAISQVATPDDNGDAEEDMYEQVAEHCRMSALMIYTELVMRHQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPDSAPADKAPPTRH
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNDIDFEVLVQGLAAAGVKHSPSELQGVIAGLLATGHGSHNEELLGVLAAHVDMPEGFG
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
AEMNGALLAVRDQLHAGYQGTGLELTLLLPADEDDLGLRVAALAQWSEGFLVGFGTGSAN
CCCCCCEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCC
THDKDLLPGVQEALSDLAAISQVATPDDNGDAEEDMYEQVAEHCRMSALMIYTELVMRHQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKPDSAPADKAPPTRH
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA