| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is insK [C]
Identifier: 110835449
GI number: 110835449
Start: 2928723
End: 2929013
Strand: Reverse
Name: insK [C]
Synonym: ABO_2588
Alternate gene names: 110835449
Gene position: 2929013-2928723 (Counterclockwise)
Preceding gene: 110835450
Following gene: 110835448
Centisome position: 93.87
GC content: 52.92
Gene sequence:
>291_bases ATGGATCGTGGTGTGGAGTATGTCGCGTACTTGACCCAGAGCGAGCTAGGCAGGCACGGCACGGCACGGCATCAGACCAG TACGAATCGGCCGAAACAATGCACGGACAACGCGCATACGGAGCCCTTCTTCCATACGCTAAAGACGGAATTGGTTCATC TGCGTAAGTTTGAGAATGATGTTGAAGCGGTGGCCGCGATTGTTGAGTTTGTCGATTTTTATAATCGGGAGCGGTTTCAC TCTGGGATTGGGTACCAAAGTCCGGCAAGCTATGTGCGGGCGTTAGGCTAA
Upstream 100 bases:
>100_bases ACCGCTTAAATACGTTCCGGCCACAAAAGGCGTGGCCTCCACCGGACTCGCTAACGCTCGCCGTTTAGCGGGGCGTTAGC CTTCCGGTCTAATATTTCAT
Downstream 100 bases:
>100_bases ATGAAGGGTAAGCATGAATATTGAATTATATACTTTCTTTCTCGTTACAACGGTGATGCTTATTTTGGTTCCTGGGCCAG CGGCTATAACGGTGGCGAAA
Product: transposase-like protein
Products: NA
Alternate protein names: Integrase Catalytic Subunit; Transposase; ISRSO8-Transposase OrfB Protein; Integrase Core Domain Protein; Transposase OrfB; Transposase-Like; ISVisp1 Transposase OrfB; IS3 Family Element Transposase OrfB; Transposase-Like Protein; ISCps3 Transposase OrfB; Integrase Catalytic Domain; ISCps9 Transposase OrfB; IS5 Family Transposase OrfB
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MDRGVEYVAYLTQSELGRHGTARHQTSTNRPKQCTDNAHTEPFFHTLKTELVHLRKFENDVEAVAAIVEFVDFYNRERFH SGIGYQSPASYVRALG
Sequences:
>Translated_96_residues MDRGVEYVAYLTQSELGRHGTARHQTSTNRPKQCTDNAHTEPFFHTLKTELVHLRKFENDVEAVAAIVEFVDFYNRERFH SGIGYQSPASYVRALG >Mature_96_residues MDRGVEYVAYLTQSELGRHGTARHQTSTNRPKQCTDNAHTEPFFHTLKTELVHLRKFENDVEAVAAIVEFVDFYNRERFH SGIGYQSPASYVRALG
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11015; Mature: 11015
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRGVEYVAYLTQSELGRHGTARHQTSTNRPKQCTDNAHTEPFFHTLKTELVHLRKFEND CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VEAVAAIVEFVDFYNRERFHSGIGYQSPASYVRALG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MDRGVEYVAYLTQSELGRHGTARHQTSTNRPKQCTDNAHTEPFFHTLKTELVHLRKFEND CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VEAVAAIVEFVDFYNRERFHSGIGYQSPASYVRALG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA