| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is nnrS
Identifier: 110835422
GI number: 110835422
Start: 2901941
End: 2903182
Strand: Reverse
Name: nnrS
Synonym: ABO_2561
Alternate gene names: NA
Gene position: 2903182-2901941 (Counterclockwise)
Preceding gene: 110835423
Following gene: 110835421
Centisome position: 93.05
GC content: 60.06
Gene sequence:
>1242_bases GTGTATTCCGGCAGGGAGAGCTCGATGACACCCCCTCCTTCTTCACCGTCCGCTTCTGATTCCACTGATGGCAAGTGCCA TCAGTGGCGGCGCATATCACAAATGCCTGTGCTGGCATTCCCGTTTCGATTATTTTTTCTTTCCGCGGCTTTTGGCGGAG CATTATTGGTACCGTTATGGATGTTTCTACTCACTCAGGGAGGCATGGATAGCCTGGCCTTGGCGCCATTGCATTGGCAT CAACATGAAATGCTGGGGGGCTTCCTTAATGCGGCCATCGCCGGGTTTTTACTAACCGCAGTCTGTAACTGGACCGGTAC GCGTCCGGTGGACGGCGGGGCATTACTGGCTCTGTGGCTGCTGTGGTTGGCTGGGCGATTGGCGATGATGTTTGGCGGTT TTTGGCCAATTCTCGCCAGCATTGTCGACTTGTCTTTCCTGCCATTGCTGGCTTGGCTGGCAGGTACTCGTATCTGGCAT GCCCGTCAGTATCGGCAATTGATTCTGATGGGGGTGCTGGCGGCCTGCTGGGTGTTGGACCTGTTGTTTCATCTGTCTGG TTCACCGCACTATTTGCAGGCGCTGGTGGTGCTGGCGGCGGTGTTGATATTGATTATCGGTGGGCGCATTACACCAGCGT TTACGCGTAACTGGCTGCAGGCCCGTGGCCGGGACAGTGCTCAGGTGCGCACCCCTTCCTGGGCTACGCCAGTGGGCCTG GTATTGGCGCTGGCGGTGGCGGTGCTGGTGGCGCTCAACATACACGGAGCGCTACTGGGGGGGCTGGCACTGGCGGCTGC GGCCATGGTGCTGCTGCGTTTATTTGGCTGGGCGCCCTGGCAGATACGTGATGAACCGCTGTTGTGGATTCTGCACCTGG GGCATTGGTGGGTGGTGCTGGGATTTGTGTTGTTGGCGCTGGCGCAATGGCATTGGGTGGCGCCGACGGCATGGCTGCAT GCCCTTGGCGCCGGCGCCATGGGCACCACCATTATGGGGGTGATGACGCGTGTAGCCATGGGGCATACCGGGCGCACCAT GGCGTTGCCCACCGGTGGTATTGTGCTGTATGCATTGGTGCTGTTGGCGGGGGTGTTGCGAGTGGTGACGGCACTGGGGT GGCTGCCCTGGGGGCTCGGGGTAGGCTGGTCCGCCGGCTTATGGAGCCTGTCCTTTGCTGGCTTCCTGTTGTTGTATTGG CAGGTGCTGACGCGCTCGCGTGTCGATGGCAAGCCGGGGTGA
Upstream 100 bases:
>100_bases AAAAGCACCCGCTATGTCTGAGTTGGCCGGGCAGTGATCCCGGTCAGTTTTATGGCATTAATTCCATCGGCTTTTTTAGT TACAGGGTATATTCGAGGGA
Downstream 100 bases:
>100_bases TAGGGTGGGGGTGAATGATAGAATAGCTGCAGCGGCCGGAGAGGAAAGATATGCACTGGCTAAAACGATGGCTTACTCCC TGGCGTCAACGGTTGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Heme-Cu Protein NnrS; Protein Involved In Response NO; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; NnrS-Like Protein; Asparagine Synthetase B; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; NnrS Protein Superfamily
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW QVLTRSRVDGKPG
Sequences:
>Translated_413_residues MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW QVLTRSRVDGKPG >Mature_413_residues MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW QVLTRSRVDGKPG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44827; Mature: 44827
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH MFLLTQGGMDSLALAPLHWHQHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWL HHHHHCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWHARQYRQLILMGVLAACWVLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHH GFVLLALAQWHWVAPTAWLHALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALV HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH LLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYWQVLTRSRVDGKPG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH MFLLTQGGMDSLALAPLHWHQHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWL HHHHHCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWHARQYRQLILMGVLAACWVLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHH GFVLLALAQWHWVAPTAWLHALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALV HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH LLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYWQVLTRSRVDGKPG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA