| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835423
Identifier: 110835423
GI number: 110835423
Start: 2903305
End: 2904192
Strand: Reverse
Name: 110835423
Synonym: ABO_2562
Alternate gene names: NA
Gene position: 2904192-2903305 (Counterclockwise)
Preceding gene: 110835424
Following gene: 110835422
Centisome position: 93.08
GC content: 51.91
Gene sequence:
>888_bases ATGAATGCCAATGTAACCGCCGTTGCGGCGCCGGTAACGCGTCAGCCGCAGAAAAAAACAAATAAAAGCGACATTCAGCC CCGCAAGATGGATTTTGAATTTGATCCGTCCATACCCCGGTATTGGTTCGACAATGACCAGTTCAAAACTATGCTATTGA CGGCGCTGTCGTGCACTTTTCCCGAGGGGGAGCGTTTTTTTGTCCGTTCCGTTCGTCATTTTCAGAAAAAGCTCACTGAT CCTTTGCTCCGTGAGCAAGTGAAAGGTTTTATCGGTCAGGAGGCGCATCATGGCAACGAGCACGATGCCTTCAATGCGTT CATGGAATCGAAGGGCGTATCTACCAGCAAAGTGGACGCCTTTGTAAGGGACGGCCTAAAGTTCATGGCCAAGTGGTTGT CACCGGAACGGCAACTGGCGAAGACTTGTGCGCTGGAACATTTCACCGCAATGCTGGCGGAAATGATTCTAGAGCATCCA GAAATTTTCGACGGCATGGACGAGCGCATGGTGCCGCTGTGGCTATGGCATGCGGTGGAAGAAAGCGAGCATAAATCGGT AGCGTTCGATGTGTATCAGGACCAGGTGGGCAGCTATTGGATGCGCACCTCGGAGATGGCGCTTACCACGGTAGAGTTTA TTGGTTTTACTATTTTCCACTACAACCAGTTGCGCGCCGAAATGGATGACTCCACCGACTGGAAGTCCGTGGGCCAGGGA ATGAACTGGTTGCTAGGAAAGCCTGGCTGGCTGCGAAAGTTGGGCAAATCCTACCTGTCGTACTACAAACGCGATTTCCA CCCTTCCAAGCGCGACAGTGGCTACCTGCGCCAGCAGGGGCTGGACAAATTGTCTAGGTTGATGAAGCGTCCGCAATTAT TGTCCTGA
Upstream 100 bases:
>100_bases TCAGGCGTTTGGTTTTTGTGCTGCAAAAATGGCACAACCTGCACTAGCTTGCTGGTTGTGGCTGCCGAATACTGTGTCTA TAAGCAACGAGGACATCGCT
Downstream 100 bases:
>100_bases TTTTTTAGGTTGAATTAGCGTGAAAAGCACCCGCTATGTCTGAGTTGGCCGGGCAGTGATCCCGGTCAGTTTTATGGCAT TAATTCCATCGGCTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; Conserved Protein UCP; FF Domain Protein; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNANVTAVAAPVTRQPQKKTNKSDIQPRKMDFEFDPSIPRYWFDNDQFKTMLLTALSCTFPEGERFFVRSVRHFQKKLTD PLLREQVKGFIGQEAHHGNEHDAFNAFMESKGVSTSKVDAFVRDGLKFMAKWLSPERQLAKTCALEHFTAMLAEMILEHP EIFDGMDERMVPLWLWHAVEESEHKSVAFDVYQDQVGSYWMRTSEMALTTVEFIGFTIFHYNQLRAEMDDSTDWKSVGQG MNWLLGKPGWLRKLGKSYLSYYKRDFHPSKRDSGYLRQQGLDKLSRLMKRPQLLS
Sequences:
>Translated_295_residues MNANVTAVAAPVTRQPQKKTNKSDIQPRKMDFEFDPSIPRYWFDNDQFKTMLLTALSCTFPEGERFFVRSVRHFQKKLTD PLLREQVKGFIGQEAHHGNEHDAFNAFMESKGVSTSKVDAFVRDGLKFMAKWLSPERQLAKTCALEHFTAMLAEMILEHP EIFDGMDERMVPLWLWHAVEESEHKSVAFDVYQDQVGSYWMRTSEMALTTVEFIGFTIFHYNQLRAEMDDSTDWKSVGQG MNWLLGKPGWLRKLGKSYLSYYKRDFHPSKRDSGYLRQQGLDKLSRLMKRPQLLS >Mature_295_residues MNANVTAVAAPVTRQPQKKTNKSDIQPRKMDFEFDPSIPRYWFDNDQFKTMLLTALSCTFPEGERFFVRSVRHFQKKLTD PLLREQVKGFIGQEAHHGNEHDAFNAFMESKGVSTSKVDAFVRDGLKFMAKWLSPERQLAKTCALEHFTAMLAEMILEHP EIFDGMDERMVPLWLWHAVEESEHKSVAFDVYQDQVGSYWMRTSEMALTTVEFIGFTIFHYNQLRAEMDDSTDWKSVGQG MNWLLGKPGWLRKLGKSYLSYYKRDFHPSKRDSGYLRQQGLDKLSRLMKRPQLLS
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34424; Mature: 34424
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANVTAVAAPVTRQPQKKTNKSDIQPRKMDFEFDPSIPRYWFDNDQFKTMLLTALSCTF CCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC PEGERFFVRSVRHFQKKLTDPLLREQVKGFIGQEAHHGNEHDAFNAFMESKGVSTSKVDA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH FVRDGLKFMAKWLSPERQLAKTCALEHFTAMLAEMILEHPEIFDGMDERMVPLWLWHAVE HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH ESEHKSVAFDVYQDQVGSYWMRTSEMALTTVEFIGFTIFHYNQLRAEMDDSTDWKSVGQG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC MNWLLGKPGWLRKLGKSYLSYYKRDFHPSKRDSGYLRQQGLDKLSRLMKRPQLLS CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNANVTAVAAPVTRQPQKKTNKSDIQPRKMDFEFDPSIPRYWFDNDQFKTMLLTALSCTF CCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC PEGERFFVRSVRHFQKKLTDPLLREQVKGFIGQEAHHGNEHDAFNAFMESKGVSTSKVDA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH FVRDGLKFMAKWLSPERQLAKTCALEHFTAMLAEMILEHPEIFDGMDERMVPLWLWHAVE HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHH ESEHKSVAFDVYQDQVGSYWMRTSEMALTTVEFIGFTIFHYNQLRAEMDDSTDWKSVGQG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC MNWLLGKPGWLRKLGKSYLSYYKRDFHPSKRDSGYLRQQGLDKLSRLMKRPQLLS CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA