| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110835421
Identifier: 110835421
GI number: 110835421
Start: 2901609
End: 2901890
Strand: Reverse
Name: 110835421
Synonym: ABO_2560
Alternate gene names: NA
Gene position: 2901890-2901609 (Counterclockwise)
Preceding gene: 110835422
Following gene: 110835418
Centisome position: 93.01
GC content: 59.22
Gene sequence:
>282_bases ATGCACTGGCTAAAACGATGGCTTACTCCCTGGCGTCAACGGTTGGGGGCTGAGCAAAAAGACACGGGGCCGGAAGCGGT CAGCAATCCGGCACCGGGGCCGGCGTTGGGTGAACACCACGCCGCCCATGGCAGTGATGAAGACCCGCAGCCTTTGCATC GGGGACGGCGTCGTTTAAAAGAAACCTACACTAGCCACTGGGATCTGGACTACATGCCCCGTGAGGAGCTGGAAGCGGTG CTGTCCGATGAGGCAGAAAAACCCGCCAATGAGAAGAGCTAA
Upstream 100 bases:
>100_bases TGTATTGGCAGGTGCTGACGCGCTCGCGTGTCGATGGCAAGCCGGGGTGATAGGGTGGGGGTGAATGATAGAATAGCTGC AGCGGCCGGAGAGGAAAGAT
Downstream 100 bases:
>100_bases AAGCACAGGTCATAAGGCATTGGCCATTATCCCGGCCGAGCCACCTGCATTTCTGTAAAGCGTTTGGATACCCGCACCAC GATGTCGCTCTGAAATGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MHWLKRWLTPWRQRLGAEQKDTGPEAVSNPAPGPALGEHHAAHGSDEDPQPLHRGRRRLKETYTSHWDLDYMPREELEAV LSDEAEKPANEKS
Sequences:
>Translated_93_residues MHWLKRWLTPWRQRLGAEQKDTGPEAVSNPAPGPALGEHHAAHGSDEDPQPLHRGRRRLKETYTSHWDLDYMPREELEAV LSDEAEKPANEKS >Mature_93_residues MHWLKRWLTPWRQRLGAEQKDTGPEAVSNPAPGPALGEHHAAHGSDEDPQPLHRGRRRLKETYTSHWDLDYMPREELEAV LSDEAEKPANEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10701; Mature: 10701
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWLKRWLTPWRQRLGAEQKDTGPEAVSNPAPGPALGEHHAAHGSDEDPQPLHRGRRRLK CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETYTSHWDLDYMPREELEAVLSDEAEKPANEKS HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHWLKRWLTPWRQRLGAEQKDTGPEAVSNPAPGPALGEHHAAHGSDEDPQPLHRGRRRLK CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETYTSHWDLDYMPREELEAVLSDEAEKPANEKS HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA