Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is nnrS

Identifier: 110835422

GI number: 110835422

Start: 2901941

End: 2903182

Strand: Reverse

Name: nnrS

Synonym: ABO_2561

Alternate gene names: NA

Gene position: 2903182-2901941 (Counterclockwise)

Preceding gene: 110835423

Following gene: 110835421

Centisome position: 93.05

GC content: 60.06

Gene sequence:

>1242_bases
GTGTATTCCGGCAGGGAGAGCTCGATGACACCCCCTCCTTCTTCACCGTCCGCTTCTGATTCCACTGATGGCAAGTGCCA
TCAGTGGCGGCGCATATCACAAATGCCTGTGCTGGCATTCCCGTTTCGATTATTTTTTCTTTCCGCGGCTTTTGGCGGAG
CATTATTGGTACCGTTATGGATGTTTCTACTCACTCAGGGAGGCATGGATAGCCTGGCCTTGGCGCCATTGCATTGGCAT
CAACATGAAATGCTGGGGGGCTTCCTTAATGCGGCCATCGCCGGGTTTTTACTAACCGCAGTCTGTAACTGGACCGGTAC
GCGTCCGGTGGACGGCGGGGCATTACTGGCTCTGTGGCTGCTGTGGTTGGCTGGGCGATTGGCGATGATGTTTGGCGGTT
TTTGGCCAATTCTCGCCAGCATTGTCGACTTGTCTTTCCTGCCATTGCTGGCTTGGCTGGCAGGTACTCGTATCTGGCAT
GCCCGTCAGTATCGGCAATTGATTCTGATGGGGGTGCTGGCGGCCTGCTGGGTGTTGGACCTGTTGTTTCATCTGTCTGG
TTCACCGCACTATTTGCAGGCGCTGGTGGTGCTGGCGGCGGTGTTGATATTGATTATCGGTGGGCGCATTACACCAGCGT
TTACGCGTAACTGGCTGCAGGCCCGTGGCCGGGACAGTGCTCAGGTGCGCACCCCTTCCTGGGCTACGCCAGTGGGCCTG
GTATTGGCGCTGGCGGTGGCGGTGCTGGTGGCGCTCAACATACACGGAGCGCTACTGGGGGGGCTGGCACTGGCGGCTGC
GGCCATGGTGCTGCTGCGTTTATTTGGCTGGGCGCCCTGGCAGATACGTGATGAACCGCTGTTGTGGATTCTGCACCTGG
GGCATTGGTGGGTGGTGCTGGGATTTGTGTTGTTGGCGCTGGCGCAATGGCATTGGGTGGCGCCGACGGCATGGCTGCAT
GCCCTTGGCGCCGGCGCCATGGGCACCACCATTATGGGGGTGATGACGCGTGTAGCCATGGGGCATACCGGGCGCACCAT
GGCGTTGCCCACCGGTGGTATTGTGCTGTATGCATTGGTGCTGTTGGCGGGGGTGTTGCGAGTGGTGACGGCACTGGGGT
GGCTGCCCTGGGGGCTCGGGGTAGGCTGGTCCGCCGGCTTATGGAGCCTGTCCTTTGCTGGCTTCCTGTTGTTGTATTGG
CAGGTGCTGACGCGCTCGCGTGTCGATGGCAAGCCGGGGTGA

Upstream 100 bases:

>100_bases
AAAAGCACCCGCTATGTCTGAGTTGGCCGGGCAGTGATCCCGGTCAGTTTTATGGCATTAATTCCATCGGCTTTTTTAGT
TACAGGGTATATTCGAGGGA

Downstream 100 bases:

>100_bases
TAGGGTGGGGGTGAATGATAGAATAGCTGCAGCGGCCGGAGAGGAAAGATATGCACTGGCTAAAACGATGGCTTACTCCC
TGGCGTCAACGGTTGGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Heme-Cu Protein NnrS; Protein Involved In Response NO; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; NnrS-Like Protein; Asparagine Synthetase B; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; NnrS Protein Superfamily

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH
QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH
ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL
VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH
ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW
QVLTRSRVDGKPG

Sequences:

>Translated_413_residues
MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH
QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH
ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL
VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH
ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW
QVLTRSRVDGKPG
>Mature_413_residues
MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLWMFLLTQGGMDSLALAPLHWH
QHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWLLWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWH
ARQYRQLILMGVLAACWVLDLLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL
VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVLGFVLLALAQWHWVAPTAWLH
ALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALVLLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYW
QVLTRSRVDGKPG

Specific function: Unknown

COG id: COG3213

COG function: function code P; Uncharacterized protein involved in response to NO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44827; Mature: 44827

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLW
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
MFLLTQGGMDSLALAPLHWHQHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWL
HHHHHCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWHARQYRQLILMGVLAACWVLD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHH
GFVLLALAQWHWVAPTAWLHALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALV
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
LLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYWQVLTRSRVDGKPG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYSGRESSMTPPPSSPSASDSTDGKCHQWRRISQMPVLAFPFRLFFLSAAFGGALLVPLW
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
MFLLTQGGMDSLALAPLHWHQHEMLGGFLNAAIAGFLLTAVCNWTGTRPVDGGALLALWL
HHHHHCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LWLAGRLAMMFGGFWPILASIVDLSFLPLLAWLAGTRIWHARQYRQLILMGVLAACWVLD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFHLSGSPHYLQALVVLAAVLILIIGGRITPAFTRNWLQARGRDSAQVRTPSWATPVGL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
VLALAVAVLVALNIHGALLGGLALAAAAMVLLRLFGWAPWQIRDEPLLWILHLGHWWVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHH
GFVLLALAQWHWVAPTAWLHALGAGAMGTTIMGVMTRVAMGHTGRTMALPTGGIVLYALV
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
LLAGVLRVVTALGWLPWGLGVGWSAGLWSLSFAGFLLLYWQVLTRSRVDGKPG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA