| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835418
Identifier: 110835418
GI number: 110835418
Start: 2897431
End: 2897838
Strand: Reverse
Name: 110835418
Synonym: ABO_2557
Alternate gene names: NA
Gene position: 2897838-2897431 (Counterclockwise)
Preceding gene: 110835421
Following gene: 110835417
Centisome position: 92.88
GC content: 52.45
Gene sequence:
>408_bases ATGCAAGAGATGACGGTACGTGCTTTGATGGCAAAACACCCCATGGCTATTGAAATGGGTACTGAGCTTACCGAGGTGGT GGATGTGTTGTTGCAGCACAAGTTTACTGGGCTGCCAGTGGTGGATAGCCAGAACAAGGTGGTGGGGTTTGTGTCGGAAC AGGATTGCCTGCGCAGGTTGTTGATTTCCAGCTATCACTGTGAAGGTTCTTTGGTCGTGGAAGAATTTATGCACGACCAG CCATTGACCGTTAGTGAAGAGGATTCGGCGGTGAATGTGGCGGAGTTGATGGTGACCCAGAAGCCTAAGATCTATCCGGT GGTGAATGCCCAGGGCGTTCTGACTGGTTTGCTGACCCGTGAGCAGGTGTTGCGAGCGCTTAAAGACAATCGCCGGGGCT GCGATTGA
Upstream 100 bases:
>100_bases GCATGGGGAATATCCACGGGTGTAAACATACCGGGTTGCTATAGTCAAAGCCATAAATCAGGACTGACCCGGCTAGGTCA ATTTCTAGAAGGAGAATGCG
Downstream 100 bases:
>100_bases GGGATATGCGTTCTGTGAACCCGTAGCGTTTGCTTCTGTGGCCCAGTGGATCTGGGCCGTGTTACGGGGCCTCTAGAAAA CCCCTTACGTGCTCAGCGTG
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Signal Transduction Protein; CBS Domain Protein; Formate/Nitrite Transporter; Signal Transduction Protein With CBS Domains; Inosine Monophosphate Dehydrogenase-Like Protein; Inosine Monophosphate Dehydrogenase-Related Protein; FOG CBS Domain Protein; CBS Domain Containing Membrane Protein; CBS Domain Containing Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRRLLISSYHCEGSLVVEEFMHDQ PLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLTREQVLRALKDNRRGCD
Sequences:
>Translated_135_residues MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRRLLISSYHCEGSLVVEEFMHDQ PLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLTREQVLRALKDNRRGCD >Mature_135_residues MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRRLLISSYHCEGSLVVEEFMHDQ PLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLTREQVLRALKDNRRGCD
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15096; Mature: 15096
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRRL CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEECHHHHHHHH LISSYHCEGSLVVEEFMHDQPLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLTR HHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH EQVLRALKDNRRGCD HHHHHHHHHCCCCCC >Mature Secondary Structure MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRRL CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEECHHHHHHHH LISSYHCEGSLVVEEFMHDQPLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLTR HHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH EQVLRALKDNRRGCD HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA