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The map label for this gene is yhiX [C]

Identifier: 110835406

GI number: 110835406

Start: 2885841

End: 2886851

Strand: Reverse

Name: yhiX [C]

Synonym: ABO_2545

Alternate gene names: 110835406

Gene position: 2886851-2885841 (Counterclockwise)

Preceding gene: 110835408

Following gene: 110835405

Centisome position: 92.52

GC content: 57.86

Gene sequence:

>1011_bases
ATGCATCAATCAAACGACAAATTGCACCCGGTGGCCATCAGCCAGGTGATGCTCAATTTCGCTCAGCGAAATGGCATTGA
CCGGCAAACCTGCCTGCTCGGCACGGGTATCTTGGAAAGCGAATTATCCAGTGGTGAAGGACTGGTGACCCGCACGCAGG
AAATGCGGCTGATCGAAAACTTGATGCTGGCCCTGCCGGAGGTGGGGGCTTCCGGGTTCGAGCTGGGTTTGCAGTACAAT
TTGGCCACCTTCGGGGTTTGGGGTTTTGCTCTGCGCACCTGTAAGACCTTGCGCGAAGCTGTTGCACTTGGGGTGCGCTA
TCTGCCTTTGAGTACGGCCTATTGCCGCATTCTTTTGTGCGAAGAGGAGGATGCCTTTGGCATCACCTTTGACCCCGATC
CCATTCCGCCCCATCTGCGCCAGTTTCTGCTGGAGCGGGATATGGCCACTTCTCTTAATCTGGCCAGGGAAATCTCCCTT
CAGGGGGCTGAATTCAAAGCCATCGAGTTCACCGGCACCCCCGATGTGGATGCTGCAGCGTTGAAAGCACTGTGCGGCAT
TGCCCCCACATTTGGAGCTGGATCCAACCGCATTATGGTTAACCGCGCCGGTGCCAGCCGGCCCTTTTCCGGCTACGATC
CGGCCCTCACTCGCATGCTTGAGCAGCAATGTCAGCAACGTATGGATACCGTGGAAAGCAGCGGTATCGCCGGCAAGGTC
CGTCAAAAATTGCTTGGCGAGTTGGGGCTGGGCGCCAGCCTCAATGATATGGCCCGCGACCTGGCCCTTTCCACCCGAAG
CCTGCGTCGCAAACTGGAGCAGGAAGGCACCAGTTACCGCGATTTAGTCGAAGAAGAGCGCCGCCAGCTGGCCCTGCAAC
TACTGGGCAACACCACCATGAAGATCGAAGAAGTCGCTGCTCACTTGGCGTACACCGACGCAGGCGGATTTGTCCGCGCC
TTCCGGCGCTGGCAGGGCTGCTCGCCAAGTACGTATCGGGAAAATGAGTGA

Upstream 100 bases:

>100_bases
GAACATTACGTAGACGGCACAACAATCAGAATAGCCACCGTGGCCAATCACCCTGCAAAAGTGGCCAGTGTGTGACAGGG
GGGTATCAACGGAACGGTTA

Downstream 100 bases:

>100_bases
TGGGGGCGTGCTGTTGATTTTTGATAGCCCATAAAAAAACCTCCCGATGGGAGGTTTTTTTATCTGGTACGCCCGAGAGG
ATTCGAACCTCTGACCTTTG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MHQSNDKLHPVAISQVMLNFAQRNGIDRQTCLLGTGILESELSSGEGLVTRTQEMRLIENLMLALPEVGASGFELGLQYN
LATFGVWGFALRTCKTLREAVALGVRYLPLSTAYCRILLCEEEDAFGITFDPDPIPPHLRQFLLERDMATSLNLAREISL
QGAEFKAIEFTGTPDVDAAALKALCGIAPTFGAGSNRIMVNRAGASRPFSGYDPALTRMLEQQCQQRMDTVESSGIAGKV
RQKLLGELGLGASLNDMARDLALSTRSLRRKLEQEGTSYRDLVEEERRQLALQLLGNTTMKIEEVAAHLAYTDAGGFVRA
FRRWQGCSPSTYRENE

Sequences:

>Translated_336_residues
MHQSNDKLHPVAISQVMLNFAQRNGIDRQTCLLGTGILESELSSGEGLVTRTQEMRLIENLMLALPEVGASGFELGLQYN
LATFGVWGFALRTCKTLREAVALGVRYLPLSTAYCRILLCEEEDAFGITFDPDPIPPHLRQFLLERDMATSLNLAREISL
QGAEFKAIEFTGTPDVDAAALKALCGIAPTFGAGSNRIMVNRAGASRPFSGYDPALTRMLEQQCQQRMDTVESSGIAGKV
RQKLLGELGLGASLNDMARDLALSTRSLRRKLEQEGTSYRDLVEEERRQLALQLLGNTTMKIEEVAAHLAYTDAGGFVRA
FRRWQGCSPSTYRENE
>Mature_336_residues
MHQSNDKLHPVAISQVMLNFAQRNGIDRQTCLLGTGILESELSSGEGLVTRTQEMRLIENLMLALPEVGASGFELGLQYN
LATFGVWGFALRTCKTLREAVALGVRYLPLSTAYCRILLCEEEDAFGITFDPDPIPPHLRQFLLERDMATSLNLAREISL
QGAEFKAIEFTGTPDVDAAALKALCGIAPTFGAGSNRIMVNRAGASRPFSGYDPALTRMLEQQCQQRMDTVESSGIAGKV
RQKLLGELGLGASLNDMARDLALSTRSLRRKLEQEGTSYRDLVEEERRQLALQLLGNTTMKIEEVAAHLAYTDAGGFVRA
FRRWQGCSPSTYRENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37053; Mature: 37053

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQSNDKLHPVAISQVMLNFAQRNGIDRQTCLLGTGILESELSSGEGLVTRTQEMRLIEN
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
LMLALPEVGASGFELGLQYNLATFGVWGFALRTCKTLREAVALGVRYLPLSTAYCRILLC
HHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHEEEEEE
EEEDAFGITFDPDPIPPHLRQFLLERDMATSLNLAREISLQGAEFKAIEFTGTPDVDAAA
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH
LKALCGIAPTFGAGSNRIMVNRAGASRPFSGYDPALTRMLEQQCQQRMDTVESSGIAGKV
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQKLLGELGLGASLNDMARDLALSTRSLRRKLEQEGTSYRDLVEEERRQLALQLLGNTTM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
KIEEVAAHLAYTDAGGFVRAFRRWQGCSPSTYRENE
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHQSNDKLHPVAISQVMLNFAQRNGIDRQTCLLGTGILESELSSGEGLVTRTQEMRLIEN
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
LMLALPEVGASGFELGLQYNLATFGVWGFALRTCKTLREAVALGVRYLPLSTAYCRILLC
HHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHEEEEEE
EEEDAFGITFDPDPIPPHLRQFLLERDMATSLNLAREISLQGAEFKAIEFTGTPDVDAAA
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH
LKALCGIAPTFGAGSNRIMVNRAGASRPFSGYDPALTRMLEQQCQQRMDTVESSGIAGKV
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQKLLGELGLGASLNDMARDLALSTRSLRRKLEQEGTSYRDLVEEERRQLALQLLGNTTM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
KIEEVAAHLAYTDAGGFVRAFRRWQGCSPSTYRENE
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]