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The map label for this gene is bbsG [H]

Identifier: 110835394

GI number: 110835394

Start: 2872140

End: 2873339

Strand: Reverse

Name: bbsG [H]

Synonym: ABO_2533

Alternate gene names: 110835394

Gene position: 2873339-2872140 (Counterclockwise)

Preceding gene: 110835395

Following gene: 110835391

Centisome position: 92.09

GC content: 54.5

Gene sequence:

>1200_bases
ATGGATTTTTCCCTGGGTCAGGAACTGGAAAGCTTGCGCCAGCGCGTGGCCATCTTTGTAGAAGCGGAAATCATGCCGCT
AGAAAACGACAAGACCAATTACGACGGCCATGAGAACTTCAAGGAAAGTGTTGTCGATGCTCTGCGCGACAAAGCCAAAG
CTGCGGGCCTGTGGGGTTTTCAGTTACCGAAAGAACGCGGTGGCCTGGGAGTGAATGTGTCAGGCATGGCGGTGCTGTAT
GAAGAGGCCGCCCGCAGCCCGTTTGGGCCGGTTGTGTTTAACTGCGCACCGCCGGACGACGGCACCATGATTATGTTGAA
CAAGATTCTCAATAATGAACAGAAAGAGCGTTGGTTGCAGCCGATGATCGACGGCAAGGTACGTTCCGCTTTTGCCATGA
CCGAACCCGAAGGTGGCTGCGGTTCAGACCCTTCGTTGACCTACACCTCGGCGACCAAGGACGGTGATAACTGGATCATC
AAGGGGCGCAAATGGTTTATCACAGGCGCGGAAGGCGCGCAGACGTTTATCCTGATAGCCAAGACCAGCGATGACCCACG
CAAGGGGCTTACTGCGTTTTTATTCGATGCGGATCAGCCCGGTTGGGAAGTGGTACGTCGCATTCCCATCATGGGGCCGG
AGGAACACGGCGGCCACTGCGAATTGAAATTCGATGGCTTGGTCATCCCAGATAAAAACCGTTTACTGGACGTGGGCGAT
GGTTTGAAAGTCACCCAGATTCGGCTTGGCACGGCGCGGCTGACCCACTGCATGCGCTGGCTGGGGTTGGCCAAGCGTTG
CATGGAAGAAGCGGCCAGTTATGTAGAAAATCGCATGAGCTTCGGCACCACCCTTGCTGAACACGAAGGCGTGCAATGGA
TGCTGGGCGACGTGGCCAAGGAAATCGAAGTGGGCCGGCTGTTAACCATGCAAGCGGCCTGGATGCTGGATCAAGGAGAC
TTTGCCAAGAAAGAAATTGCCATGGCAAAAATTCATGTGGCGGACACATTACATAAAGCGGCAGATACGGCGATTCAATT
ATGTGGAGCCCGTGGTTATTCCAAGGATACGCTGCTGGAGTGGATCTATCGCTACGCTCGCCAGGCGCGCCTGGTAGATG
GCGCTAGCGAAGTGCACAAAATGGTGCTCTCGCGTCTGTATTTGAAAGAGAAGCGTGATTTCTTTAAGTGGCGAGTGTAG

Upstream 100 bases:

>100_bases
CCACCTTTGTACTACTCTTTAATGCTCGCCTACCGCTAGCCGCGGCAATCGTCGTTGCGGGTAAAGCGGCGCTTTTTTCA
ATCAGTAGCAAGGAATGATC

Downstream 100 bases:

>100_bases
GGCCGCTGTGTGTTTGCTATGCGCGTCGCTTGCGGTTGTGGCGTTGTGGTTAACCATCGCAGAAAATTTCTGCTTTGGCC
GTCAGTACGGTAGCGACGTT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDFSLGQELESLRQRVAIFVEAEIMPLENDKTNYDGHENFKESVVDALRDKAKAAGLWGFQLPKERGGLGVNVSGMAVLY
EEAARSPFGPVVFNCAPPDDGTMIMLNKILNNEQKERWLQPMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDGDNWII
KGRKWFITGAEGAQTFILIAKTSDDPRKGLTAFLFDADQPGWEVVRRIPIMGPEEHGGHCELKFDGLVIPDKNRLLDVGD
GLKVTQIRLGTARLTHCMRWLGLAKRCMEEAASYVENRMSFGTTLAEHEGVQWMLGDVAKEIEVGRLLTMQAAWMLDQGD
FAKKEIAMAKIHVADTLHKAADTAIQLCGARGYSKDTLLEWIYRYARQARLVDGASEVHKMVLSRLYLKEKRDFFKWRV

Sequences:

>Translated_399_residues
MDFSLGQELESLRQRVAIFVEAEIMPLENDKTNYDGHENFKESVVDALRDKAKAAGLWGFQLPKERGGLGVNVSGMAVLY
EEAARSPFGPVVFNCAPPDDGTMIMLNKILNNEQKERWLQPMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDGDNWII
KGRKWFITGAEGAQTFILIAKTSDDPRKGLTAFLFDADQPGWEVVRRIPIMGPEEHGGHCELKFDGLVIPDKNRLLDVGD
GLKVTQIRLGTARLTHCMRWLGLAKRCMEEAASYVENRMSFGTTLAEHEGVQWMLGDVAKEIEVGRLLTMQAAWMLDQGD
FAKKEIAMAKIHVADTLHKAADTAIQLCGARGYSKDTLLEWIYRYARQARLVDGASEVHKMVLSRLYLKEKRDFFKWRV
>Mature_399_residues
MDFSLGQELESLRQRVAIFVEAEIMPLENDKTNYDGHENFKESVVDALRDKAKAAGLWGFQLPKERGGLGVNVSGMAVLY
EEAARSPFGPVVFNCAPPDDGTMIMLNKILNNEQKERWLQPMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDGDNWII
KGRKWFITGAEGAQTFILIAKTSDDPRKGLTAFLFDADQPGWEVVRRIPIMGPEEHGGHCELKFDGLVIPDKNRLLDVGD
GLKVTQIRLGTARLTHCMRWLGLAKRCMEEAASYVENRMSFGTTLAEHEGVQWMLGDVAKEIEVGRLLTMQAAWMLDQGD
FAKKEIAMAKIHVADTLHKAADTAIQLCGARGYSKDTLLEWIYRYARQARLVDGASEVHKMVLSRLYLKEKRDFFKWRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=392, Percent_Identity=35.2040816326531, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI48976061, Length=405, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI211971008, Length=405, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI4501859, Length=382, Percent_Identity=29.8429319371728, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI187960098, Length=404, Percent_Identity=27.970297029703, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI4557231, Length=404, Percent_Identity=27.970297029703, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI4557233, Length=394, Percent_Identity=29.9492385786802, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI21361497, Length=371, Percent_Identity=29.1105121293801, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI7656849, Length=393, Percent_Identity=26.2086513994911, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=26.1658031088083, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=27.1641791044776, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4501857, Length=389, Percent_Identity=26.9922879177378, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI76496475, Length=393, Percent_Identity=27.4809160305344, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4557235, Length=393, Percent_Identity=27.4809160305344, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4503943, Length=285, Percent_Identity=27.0175438596491, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI87081958, Length=406, Percent_Identity=27.0935960591133, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786223, Length=398, Percent_Identity=25.3768844221106, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17562446, Length=362, Percent_Identity=33.1491712707182, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17570075, Length=392, Percent_Identity=30.1020408163265, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17534899, Length=394, Percent_Identity=28.6802030456853, Blast_Score=164, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI17569725, Length=342, Percent_Identity=30.4093567251462, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=28.8659793814433, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17538396, Length=397, Percent_Identity=28.7153652392947, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17506239, Length=355, Percent_Identity=27.0422535211268, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI71990804, Length=300, Percent_Identity=29, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=347, Percent_Identity=26.2247838616715, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=376, Percent_Identity=26.063829787234, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=336, Percent_Identity=24.4047619047619, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=341, Percent_Identity=24.3401759530792, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=289, Percent_Identity=26.643598615917, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=310, Percent_Identity=25.8064516129032, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=243, Percent_Identity=26.3374485596708, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17531909, Length=254, Percent_Identity=24.8031496062992, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534353, Length=296, Percent_Identity=22.972972972973, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24660351, Length=388, Percent_Identity=30.1546391752577, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24646207, Length=388, Percent_Identity=29.639175257732, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=30.4347826086957, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24666513, Length=393, Percent_Identity=29.7709923664122, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI21355753, Length=386, Percent_Identity=27.720207253886, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI281363737, Length=400, Percent_Identity=27.5, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI19920834, Length=291, Percent_Identity=28.8659793814433, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 44723; Mature: 44723

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLGQELESLRQRVAIFVEAEIMPLENDKTNYDGHENFKESVVDALRDKAKAAGLWGF
CCCCHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QLPKERGGLGVNVSGMAVLYEEAARSPFGPVVFNCAPPDDGTMIMLNKILNNEQKERWLQ
CCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCHHHHHHHH
PMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDGDNWIIKGRKWFITGAEGAQTFILIA
HHHCCHHHHHEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCEEEEEEE
KTSDDPRKGLTAFLFDADQPGWEVVRRIPIMGPEEHGGHCELKFDGLVIPDKNRLLDVGD
ECCCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCEEECCC
GLKVTQIRLGTARLTHCMRWLGLAKRCMEEAASYVENRMSFGTTLAEHEGVQWMLGDVAK
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
EIEVGRLLTMQAAWMLDQGDFAKKEIAMAKIHVADTLHKAADTAIQLCGARGYSKDTLLE
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WIYRYARQARLVDGASEVHKMVLSRLYLKEKRDFFKWRV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSLGQELESLRQRVAIFVEAEIMPLENDKTNYDGHENFKESVVDALRDKAKAAGLWGF
CCCCHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
QLPKERGGLGVNVSGMAVLYEEAARSPFGPVVFNCAPPDDGTMIMLNKILNNEQKERWLQ
CCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHCCHHHHHHHH
PMIDGKVRSAFAMTEPEGGCGSDPSLTYTSATKDGDNWIIKGRKWFITGAEGAQTFILIA
HHHCCHHHHHEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCEEEEEEE
KTSDDPRKGLTAFLFDADQPGWEVVRRIPIMGPEEHGGHCELKFDGLVIPDKNRLLDVGD
ECCCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCEEECCC
GLKVTQIRLGTARLTHCMRWLGLAKRCMEEAASYVENRMSFGTTLAEHEGVQWMLGDVAK
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHH
EIEVGRLLTMQAAWMLDQGDFAKKEIAMAKIHVADTLHKAADTAIQLCGARGYSKDTLLE
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WIYRYARQARLVDGASEVHKMVLSRLYLKEKRDFFKWRV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]