| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is glnK-2 [H]
Identifier: 110835391
GI number: 110835391
Start: 2869464
End: 2869802
Strand: Reverse
Name: glnK-2 [H]
Synonym: ABO_2530
Alternate gene names: 110835391
Gene position: 2869802-2869464 (Counterclockwise)
Preceding gene: 110835394
Following gene: 110835390
Centisome position: 91.98
GC content: 51.92
Gene sequence:
>339_bases ATGAAATTGGTTACTGCCGTAATTAAGCCGTTCAAATTGGATGACGTGCGTGAAGCACTCTCCGAGATTGGCGTGCAGGG CATCACTGTTACTGAAGTGAAAGGCTTTGGGCGTCAGAAAGGTCACACCGAGCTGTACCGGGGTGCCGAGTACGTGGTGG ATTTCTTGCCCAAGGTAAAAATCGAAGTGGCCATCGCCGAGTCGAGCTTGGACCAAGTGATTGAAGCCATCGCGAAAGCC GCTAATACCGGCAAAATTGGTGACGGCAAAATCTTCGTTACCTCCCTTGAGCAAGCGATTCGCATCCGTACCGGTGAAAC CGGCGAGGACGCGATTTAA
Upstream 100 bases:
>100_bases ATTGGGTCAGAGCGTTCGCGCAAGATGTGGATCGGGAACCATAACGGGGCTCGAAGAGAAACGGACGTCACCGGACGCGG TGAAAGCTGAGGAGAAAAAA
Downstream 100 bases:
>100_bases GTTTTACCGTGTTTTGAATTGACCCATGCCAGGGCTTTAAGAGAACACGCTTCCATTTTCGGAGGGTTGCATTGTGGAAA ACCAAATTTTTGAATTGAAA
Product: nitrogen regulatory protein P-II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEVAIAESSLDQVIEAIAKA ANTGKIGDGKIFVTSLEQAIRIRTGETGEDAI
Sequences:
>Translated_112_residues MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEVAIAESSLDQVIEAIAKA ANTGKIGDGKIFVTSLEQAIRIRTGETGEDAI >Mature_112_residues MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEVAIAESSLDQVIEAIAKA ANTGKIGDGKIFVTSLEQAIRIRTGETGEDAI
Specific function: P-II indirectly controls the transcription of the glutamine synthetase gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is uridylylated to P-II-UMP, these events are reversed
COG id: COG0347
COG function: function code E; Nitrogen regulatory protein PII
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P(II) protein family [H]
Homologues:
Organism=Escherichia coli, GI1786655, Length=112, Percent_Identity=75, Blast_Score=173, Evalue=3e-45, Organism=Escherichia coli, GI1788904, Length=112, Percent_Identity=66.9642857142857, Blast_Score=158, Evalue=8e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002187 - InterPro: IPR011322 - InterPro: IPR015867 - InterPro: IPR017918 - InterPro: IPR002332 [H]
Pfam domain/function: PF00543 P-II [H]
EC number: NA
Molecular weight: Translated: 12102; Mature: 12102
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00496 PII_GLNB_UMP ; PS00638 PII_GLNB_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE IEVAIAESSLDQVIEAIAKAANTGKIGDGKIFVTSLEQAIRIRTGETGEDAI EEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEHEEHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKLVTAVIKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE IEVAIAESSLDQVIEAIAKAANTGKIGDGKIFVTSLEQAIRIRTGETGEDAI EEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEHEEHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]