| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ptsP [H]
Identifier: 110835388
GI number: 110835388
Start: 2865663
End: 2866106
Strand: Reverse
Name: ptsP [H]
Synonym: ABO_2527
Alternate gene names: 110835388
Gene position: 2866106-2865663 (Counterclockwise)
Preceding gene: 110835389
Following gene: 110835386
Centisome position: 91.86
GC content: 52.93
Gene sequence:
>444_bases GTGTCTTTACCCCCGGATTTTATGCATGCCCGTGTGGATGCAGTGAGGAAGAAATTGAACGTGCAGGTGTGCAGCCTGTA TCAGGCCGATAGCAGCCGAAAAAGCTTGGAAATCGTTGCCACCAGTGGTCTGAATCAGCGTGTGCTGGGGGCTACTCTAA CGTATAGCCAAGGATTGACAGGCAAGGTGGCTCGCACCCGAAGTACTGTGGTGGCGCGGGACGTGCAGGCTCATATGGAT TATTTCTATGTGCCCGGTTCGGATGAAGAACATTTCCGCAGTTACCTGGGCATTCCGCTGGAATGCGACAGCGTCCTCTA CGGTGTGTTGGTGGTGCAAACAAGGGTGAAAAAAACGTTTTTTCTGAAAGATATCAGGGAGCTTCACAACGGAGGCCGGG ATTTATTGGATGCGCTCAAGTTGAGCGTACGGTGGGCGGGCTAG
Upstream 100 bases:
>100_bases TGCAGGGGCGTCCTGATTTGCTGGGCGCATGGCCCGCAGGCACGAAAATTGAAAGGTATAGAGAGCTGACATTCACGCTG GCGAACAGAGAGGTGGTCGC
Downstream 100 bases:
>100_bases AAGCGCTTGTGAGCTTCTAGCCACGAGTAAATAAAAGGCAAAGTAAGTTGCCATGCCATGGTGTTGATATATTCGCCGTT AACAGTGCGAAGCTTTGCCT
Product: phosphoenolpyruvate-protein phosphotransferase fragment
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSLPPDFMHARVDAVRKKLNVQVCSLYQADSSRKSLEIVATSGLNQRVLGATLTYSQGLTGKVARTRSTVVARDVQAHMD YFYVPGSDEEHFRSYLGIPLECDSVLYGVLVVQTRVKKTFFLKDIRELHNGGRDLLDALKLSVRWAG
Sequences:
>Translated_147_residues MSLPPDFMHARVDAVRKKLNVQVCSLYQADSSRKSLEIVATSGLNQRVLGATLTYSQGLTGKVARTRSTVVARDVQAHMD YFYVPGSDEEHFRSYLGIPLECDSVLYGVLVVQTRVKKTFFLKDIRELHNGGRDLLDALKLSVRWAG >Mature_146_residues SLPPDFMHARVDAVRKKLNVQVCSLYQADSSRKSLEIVATSGLNQRVLGATLTYSQGLTGKVARTRSTVVARDVQAHMDY FYVPGSDEEHFRSYLGIPLECDSVLYGVLVVQTRVKKTFFLKDIRELHNGGRDLLDALKLSVRWAG
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=98, Percent_Identity=38.7755102040816, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 16460; Mature: 16329
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPPDFMHARVDAVRKKLNVQVCSLYQADSSRKSLEIVATSGLNQRVLGATLTYSQGLT CCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCCHHHHEEEECCCCCC GKVARTRSTVVARDVQAHMDYFYVPGSDEEHFRSYLGIPLECDSVLYGVLVVQTRVKKTF CHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FLKDIRELHNGGRDLLDALKLSVRWAG HHHHHHHHHCCCHHHHHHHHHHHEECC >Mature Secondary Structure SLPPDFMHARVDAVRKKLNVQVCSLYQADSSRKSLEIVATSGLNQRVLGATLTYSQGLT CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCCHHHHEEEECCCCCC GKVARTRSTVVARDVQAHMDYFYVPGSDEEHFRSYLGIPLECDSVLYGVLVVQTRVKKTF CHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH FLKDIRELHNGGRDLLDALKLSVRWAG HHHHHHHHHCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]