The gene/protein map for NC_008260 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is pfeA [H]

Identifier: 110835342

GI number: 110835342

Start: 2812258

End: 2814531

Strand: Reverse

Name: pfeA [H]

Synonym: ABO_2481

Alternate gene names: 110835342

Gene position: 2814531-2812258 (Counterclockwise)

Preceding gene: 110835343

Following gene: 110835339

Centisome position: 90.21

GC content: 53.87

Gene sequence:

>2274_bases
ATGAAGCGGTCTTTGGGAATGCCAATTCTGGTAGGTGTTGTGGCTAACGGCTTAGCTATGCCGGCGGTTGCGCAAGAGAA
TACGGTCCATGAACTGGGTGCGGTCACGGTAGTTTCTGCCGCTGGTTTCGAGCAGAAAATTACCGATGCCCCAGCCAGTA
TTTCGGTAATTAGCCAACAGGAACTGCATAGCCGGCCTTTCACCTCCGTGGTGGATGCGGTGCGTGAGCTGGAAGGGGTC
GACGTGGGGGAAACCCGTGACAAGACGGGCCAGTCCACTATCTCCATGCGCGGCATGGGGGCGGACTATACGCTAATCCT
CATTGATGGCCGCCGGCAAAATAACCACGGCGATATCTACCCCAACAATTTTGGCGGCAACCAGTTTAATCATATGCCGC
CGCTAGAAGCCATTGAGCGCATCGAAGTTATCCGTGGGCCGTCGTCCACTCTTTATGGTGCGGATGCCATTGGTGGGGTG
ATTAATATCATCACCAAAAAAGAGTATGAAAAATGGGGCGGCAGCATCAACGTGAGTCGCACTATTCAGGAATATGACCA
GTACGGTGATGCGACCTCAACGGATTTCTCCGTGTCTGGCCCGTTGGGCGATCAGTTTGGCCTGGCGTTGCGAGGCAGTC
TCTACGACCAGGATGCATCTAGCCCGGAATACGATCCGGTGACCGATCCTAGTGGGGTACTTCAGGAGCGAGAACTGGGT
TTCGGCAGTGGTGGTCGTACTGTAGACAATGAGGACACGGCTCTGGGTTTCACTTTGAGATGGACCCCCACGGATAATCA
GCGTATCTCGCTCGATTATGATGATTCCGTGCAAACCTACGACAACTCAGAGAGTCAGTTGGGTACCCATGATAGCGCTG
ACCGCCTACCTCGGGCGGGCTATGCACAAGACCAGGAGTTCACCCGTGAGCAAATAGCGCTGACTCACGAGGGCGAGTGG
GGCTTTGGTTTGAGCAATGTTTCGTTGACCTATTTGTCCACCAATAATGAAGGGCGCACCTTGCCACTAACCGCGGATGA
GCGTCAGCAATATGACGATATCGTTGCGACCAATGCGGATTGTGTTGCGGATGCCGGCAGTGACGCCTGCCTTGCCGTGC
TAGGCTCCACTTTCTTACCACGCCCGGAGCGGACTTTGGAAAGCAGCGAGCTGCGCCTGGACGGTAAGCTGGACCTGCCC
ATCAATGATCAGCACTTTGTGGTGGTAGGTACCCAGATTCTTCGCGGTGAGTTGGAAGATGGCGTGTTCGGCCTAGAGAG
TGGTGACGCGGGCGAGGTGTTTGAGAATAATTTCTGGGCGCTGTATGCCGAAGATAACTGGACGCCGGTGGAGCCGTTTA
CGCTGACAGCGGGTGTGCGTTACGACAACCATGAAACCTTTGGCGATCAGATTAGCCCGCGCCTCTATGGTGTTTATACG
CTTTCACCAAGCTGGACAGTGAAAGGCGGTGTCAGCACGGGCTATAAGACCCCCAAAACCATTGACTTATACGACGGCAT
TACCGGCTTTGGCGGGCAGGGCACACGCCCCTGGGTGGGCAACCCGGATTTGGAGCCGGAAACCAGCGTCAATTCTGAAA
TCGCTCTTTATTGGGAAAGTCCGAACCGACATAGCGCTAACCTGACGGTGTTCCATAACGACTTTAAAGACAAGATTGTT
CGCCAAGACAGCGCGTTGTGTTCAGCCACTGGTGGACAAACGCCCTGTGTGGACCTAGGGGACTATGACACGGTGGACGG
CATTGTTACCTGGCCAATGAATGTGGATGAAGCGGTGATTCAAGGTGTGGAAGTGGCAGGGCGCTACCAGATCTCTTCCC
GCTGGTCATTACGTGCCAATTACACCTATATCGACAGTGAACAGACAAGTGGTGAAGAGAAAGGTTACTCACTTACGGGC
ACCGCTCGGCATATGTTTAACGGCACGCTGGATTGGCAAACCACCCAGGCGTTTGCCATGTTTCTGACGGTAGAAGGGCG
CCAAGATCGCTTCCGGGGCTTTGGCAGTACAGATGCCAGCGGTGGTGAATACTGGAAGAACTATGAGATTTATCACCTTG
GTGCCCGTTTGGCGCTCAACAAATCTGTTACCTTGCATGCCCGGATTAACAACCTGCTGGATGAAGACTTTACTTCCTAT
GATGTGGGCTTCGTGGATGACGGTAGCGGTGGCTATGATGTGGAGTACTACGATGACTACAACAATAAGGATGCCCGTCG
TAACTTCTGGGTGGGTCTGCAAGCGACCTTCTAA

Upstream 100 bases:

>100_bases
ACAAACATCACAAAATAAATATTGTTCGCATTTGATAATGGTTATTGTTTAGGGAATGCTCTCCCCCGTTTTGATTGATA
TGGCAATACGGGGGTAGAGG

Downstream 100 bases:

>100_bases
GTGATGTTCCGAAAACTGGGCTGCACTCAAGTGTCGTCGTGAGATTGAAAATAAAACGGCATGGTGAAGGAATTCGCCAT
GCCGTTTTACTATTGCGCGA

Product: outer membrane ferric enterobactin receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MKRSLGMPILVGVVANGLAMPAVAQENTVHELGAVTVVSAAGFEQKITDAPASISVISQQELHSRPFTSVVDAVRELEGV
DVGETRDKTGQSTISMRGMGADYTLILIDGRRQNNHGDIYPNNFGGNQFNHMPPLEAIERIEVIRGPSSTLYGADAIGGV
INIITKKEYEKWGGSINVSRTIQEYDQYGDATSTDFSVSGPLGDQFGLALRGSLYDQDASSPEYDPVTDPSGVLQERELG
FGSGGRTVDNEDTALGFTLRWTPTDNQRISLDYDDSVQTYDNSESQLGTHDSADRLPRAGYAQDQEFTREQIALTHEGEW
GFGLSNVSLTYLSTNNEGRTLPLTADERQQYDDIVATNADCVADAGSDACLAVLGSTFLPRPERTLESSELRLDGKLDLP
INDQHFVVVGTQILRGELEDGVFGLESGDAGEVFENNFWALYAEDNWTPVEPFTLTAGVRYDNHETFGDQISPRLYGVYT
LSPSWTVKGGVSTGYKTPKTIDLYDGITGFGGQGTRPWVGNPDLEPETSVNSEIALYWESPNRHSANLTVFHNDFKDKIV
RQDSALCSATGGQTPCVDLGDYDTVDGIVTWPMNVDEAVIQGVEVAGRYQISSRWSLRANYTYIDSEQTSGEEKGYSLTG
TARHMFNGTLDWQTTQAFAMFLTVEGRQDRFRGFGSTDASGGEYWKNYEIYHLGARLALNKSVTLHARINNLLDEDFTSY
DVGFVDDGSGGYDVEYYDDYNNKDARRNFWVGLQATF

Sequences:

>Translated_757_residues
MKRSLGMPILVGVVANGLAMPAVAQENTVHELGAVTVVSAAGFEQKITDAPASISVISQQELHSRPFTSVVDAVRELEGV
DVGETRDKTGQSTISMRGMGADYTLILIDGRRQNNHGDIYPNNFGGNQFNHMPPLEAIERIEVIRGPSSTLYGADAIGGV
INIITKKEYEKWGGSINVSRTIQEYDQYGDATSTDFSVSGPLGDQFGLALRGSLYDQDASSPEYDPVTDPSGVLQERELG
FGSGGRTVDNEDTALGFTLRWTPTDNQRISLDYDDSVQTYDNSESQLGTHDSADRLPRAGYAQDQEFTREQIALTHEGEW
GFGLSNVSLTYLSTNNEGRTLPLTADERQQYDDIVATNADCVADAGSDACLAVLGSTFLPRPERTLESSELRLDGKLDLP
INDQHFVVVGTQILRGELEDGVFGLESGDAGEVFENNFWALYAEDNWTPVEPFTLTAGVRYDNHETFGDQISPRLYGVYT
LSPSWTVKGGVSTGYKTPKTIDLYDGITGFGGQGTRPWVGNPDLEPETSVNSEIALYWESPNRHSANLTVFHNDFKDKIV
RQDSALCSATGGQTPCVDLGDYDTVDGIVTWPMNVDEAVIQGVEVAGRYQISSRWSLRANYTYIDSEQTSGEEKGYSLTG
TARHMFNGTLDWQTTQAFAMFLTVEGRQDRFRGFGSTDASGGEYWKNYEIYHLGARLALNKSVTLHARINNLLDEDFTSY
DVGFVDDGSGGYDVEYYDDYNNKDARRNFWVGLQATF
>Mature_757_residues
MKRSLGMPILVGVVANGLAMPAVAQENTVHELGAVTVVSAAGFEQKITDAPASISVISQQELHSRPFTSVVDAVRELEGV
DVGETRDKTGQSTISMRGMGADYTLILIDGRRQNNHGDIYPNNFGGNQFNHMPPLEAIERIEVIRGPSSTLYGADAIGGV
INIITKKEYEKWGGSINVSRTIQEYDQYGDATSTDFSVSGPLGDQFGLALRGSLYDQDASSPEYDPVTDPSGVLQERELG
FGSGGRTVDNEDTALGFTLRWTPTDNQRISLDYDDSVQTYDNSESQLGTHDSADRLPRAGYAQDQEFTREQIALTHEGEW
GFGLSNVSLTYLSTNNEGRTLPLTADERQQYDDIVATNADCVADAGSDACLAVLGSTFLPRPERTLESSELRLDGKLDLP
INDQHFVVVGTQILRGELEDGVFGLESGDAGEVFENNFWALYAEDNWTPVEPFTLTAGVRYDNHETFGDQISPRLYGVYT
LSPSWTVKGGVSTGYKTPKTIDLYDGITGFGGQGTRPWVGNPDLEPETSVNSEIALYWESPNRHSANLTVFHNDFKDKIV
RQDSALCSATGGQTPCVDLGDYDTVDGIVTWPMNVDEAVIQGVEVAGRYQISSRWSLRANYTYIDSEQTSGEEKGYSLTG
TARHMFNGTLDWQTTQAFAMFLTVEGRQDRFRGFGSTDASGGEYWKNYEIYHLGARLALNKSVTLHARINNLLDEDFTSY
DVGFVDDGSGGYDVEYYDDYNNKDARRNFWVGLQATF

Specific function: Involved in the initial step of iron uptake by binding ferric vibriobactin, an iron chelatin siderophore that allows V.cholerae to extract iron from the environment [H]

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=737, Percent_Identity=32.0217096336499, Blast_Score=302, Evalue=4e-83,
Organism=Escherichia coli, GI1786798, Length=750, Percent_Identity=27.6, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1790405, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 83236; Mature: 83236

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLGMPILVGVVANGLAMPAVAQENTVHELGAVTVVSAAGFEQKITDAPASISVISQQ
CCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCHHHHCCCCCEEEEEEHH
ELHSRPFTSVVDAVRELEGVDVGETRDKTGQSTISMRGMGADYTLILIDGRRQNNHGDIY
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCC
PNNFGGNQFNHMPPLEAIERIEVIRGPSSTLYGADAIGGVINIITKKEYEKWGGSINVSR
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHHHHHHCCCEEEEHH
TIQEYDQYGDATSTDFSVSGPLGDQFGLALRGSLYDQDASSPEYDPVTDPSGVLQERELG
HHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCC
FGSGGRTVDNEDTALGFTLRWTPTDNQRISLDYDDSVQTYDNSESQLGTHDSADRLPRAG
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHCCCCC
YAQDQEFTREQIALTHEGEWGFGLSNVSLTYLSTNNEGRTLPLTADERQQYDDIVATNAD
CCCCHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHCCCCC
CVADAGSDACLAVLGSTFLPRPERTLESSELRLDGKLDLPINDQHFVVVGTQILRGELED
CEECCCCCHHHHHHCCCCCCCCCHHCCCCCEEECCEECCCCCCCEEEEEEHHHHHCCCCC
GVFGLESGDAGEVFENNFWALYAEDNWTPVEPFTLTAGVRYDNHETFGDQISPRLYGVYT
CEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEE
LSPSWTVKGGVSTGYKTPKTIDLYDGITGFGGQGTRPWVGNPDLEPETSVNSEIALYWES
ECCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PNRHSANLTVFHNDFKDKIVRQDSALCSATGGQTPCVDLGDYDTVDGIVTWPMNVDEAVI
CCCCCCEEEEEECCHHHHHHHCCCCCEECCCCCCCEEECCCCCCCCCEEECCCCCCHHHH
QGVEVAGRYQISSRWSLRANYTYIDSEQTSGEEKGYSLTGTARHMFNGTLDWQTTQAFAM
CCHHEEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEECHHHHHCCCCCCCCCEEEEE
FLTVEGRQDRFRGFGSTDASGGEYWKNYEIYHLGARLALNKSVTLHARINNLLDEDFTSY
EEEEECCHHHHCCCCCCCCCCCCHHCCEEEEEECEEEEECCCEEEEEHHHHHHHCCCCCC
DVGFVDDGSGGYDVEYYDDYNNKDARRNFWVGLQATF
CCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRSLGMPILVGVVANGLAMPAVAQENTVHELGAVTVVSAAGFEQKITDAPASISVISQQ
CCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCHHHHCCCCCEEEEEEHH
ELHSRPFTSVVDAVRELEGVDVGETRDKTGQSTISMRGMGADYTLILIDGRRQNNHGDIY
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCC
PNNFGGNQFNHMPPLEAIERIEVIRGPSSTLYGADAIGGVINIITKKEYEKWGGSINVSR
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHHHHHHCCCEEEEHH
TIQEYDQYGDATSTDFSVSGPLGDQFGLALRGSLYDQDASSPEYDPVTDPSGVLQERELG
HHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCC
FGSGGRTVDNEDTALGFTLRWTPTDNQRISLDYDDSVQTYDNSESQLGTHDSADRLPRAG
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHCCCCC
YAQDQEFTREQIALTHEGEWGFGLSNVSLTYLSTNNEGRTLPLTADERQQYDDIVATNAD
CCCCHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHCCCCC
CVADAGSDACLAVLGSTFLPRPERTLESSELRLDGKLDLPINDQHFVVVGTQILRGELED
CEECCCCCHHHHHHCCCCCCCCCHHCCCCCEEECCEECCCCCCCEEEEEEHHHHHCCCCC
GVFGLESGDAGEVFENNFWALYAEDNWTPVEPFTLTAGVRYDNHETFGDQISPRLYGVYT
CEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEE
LSPSWTVKGGVSTGYKTPKTIDLYDGITGFGGQGTRPWVGNPDLEPETSVNSEIALYWES
ECCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PNRHSANLTVFHNDFKDKIVRQDSALCSATGGQTPCVDLGDYDTVDGIVTWPMNVDEAVI
CCCCCCEEEEEECCHHHHHHHCCCCCEECCCCCCCEEECCCCCCCCCEEECCCCCCHHHH
QGVEVAGRYQISSRWSLRANYTYIDSEQTSGEEKGYSLTGTARHMFNGTLDWQTTQAFAM
CCHHEEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEECHHHHHCCCCCCCCCEEEEE
FLTVEGRQDRFRGFGSTDASGGEYWKNYEIYHLGARLALNKSVTLHARINNLLDEDFTSY
EEEEECCHHHHCCCCCCCCCCCCHHCCEEEEEECEEEEECCCEEEEEHHHHHHHCCCCCC
DVGFVDDGSGGYDVEYYDDYNNKDARRNFWVGLQATF
CCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1406279; 2174861 [H]