| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835270
Identifier: 110835270
GI number: 110835270
Start: 2730340
End: 2730555
Strand: Reverse
Name: 110835270
Synonym: ABO_2409
Alternate gene names: NA
Gene position: 2730555-2730340 (Counterclockwise)
Preceding gene: 110835272
Following gene: 110835269
Centisome position: 87.51
GC content: 57.87
Gene sequence:
>216_bases ATGAGCGAGTTGCAACCCGGTCGTTACCGGCACTTCAAAGGTAACGAATACCAAGTGCTTGGCTTGGCAACCCATTCTGA GACCGGCGAAACCGTGGTGGTTTACCACCCGCTCTACGGGGATCAGGCCCTGTGGGTGCGCCCATTGGCCATGTTTATCG AGACCGTAGAGCGAGATGGCAAAGTGCAGCCCCGCTTTGCTCGGGTGGGGGATTGA
Upstream 100 bases:
>100_bases TGGAAGTGCAGGGTACCCATGTGGGGCTACCGTGGAATCCTCAAGTGCTGGCGGCCATTGCCGAGCGTTTGCCGCGCAGC CCGCTACCAGGAGATGTGCC
Downstream 100 bases:
>100_bases GCAGAAAGGAGAGCATTCAAAGTAGAAAGGCGTGGGCAGGGCTGTTGGCGTGGCGCCCGGCCTTCCATGTGGCCAGCGCG AAGCAATAACCGTTCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSELQPGRYRHFKGNEYQVLGLATHSETGETVVVYHPLYGDQALWVRPLAMFIETVERDGKVQPRFARVGD
Sequences:
>Translated_71_residues MSELQPGRYRHFKGNEYQVLGLATHSETGETVVVYHPLYGDQALWVRPLAMFIETVERDGKVQPRFARVGD >Mature_70_residues SELQPGRYRHFKGNEYQVLGLATHSETGETVVVYHPLYGDQALWVRPLAMFIETVERDGKVQPRFARVGD
Specific function: Unknown
COG id: COG4728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8148; Mature: 8017
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELQPGRYRHFKGNEYQVLGLATHSETGETVVVYHPLYGDQALWVRPLAMFIETVERDG CCCCCCCCEECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC KVQPRFARVGD CCCCCEEECCC >Mature Secondary Structure SELQPGRYRHFKGNEYQVLGLATHSETGETVVVYHPLYGDQALWVRPLAMFIETVERDG CCCCCCCEECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC KVQPRFARVGD CCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA