BacMap

Definition	Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession	NC_008260
Length	3,120,143

Click here to switch to the map view.

The map label for this gene is srmB [H]

Identifier: 110835269

GI number: 110835269

Start: 2728791

End: 2730143

Strand: Reverse

Name: srmB [H]

Synonym: ABO_2408

Alternate gene names: 110835269

Gene position: 2730143-2728791 (Counterclockwise)

Preceding gene: 110835270

Following gene: 110835268

Centisome position: 87.5

GC content: 55.65

Gene sequence:

>1353_bases
ATGTCTTCGTTTGCCGACCTGAACCTGCATGAGCGCTTAATCAAGGCGCTTGGTGAGCTGGAAATTACCACCCCGACCCC
TGTTCAGACGGCAGCCATTCCTGCGGCGCTTGAAGGCCGCGATTTGCGTGTAGTGGCCCGCACCGGTAGCGGTAAAACCG
CGGCATTTTTGCTGCCCATGCTGCATCAGCTGCTCCAATATTCCCGCCCGCGTACCGACACCCGCGCCTTGATTCTGTTG
CCCACTCGCGAGTTGGCCCAGCAGACCCTCAAGCAAGTAGAAGCGCTAGGCCGTTATACCTTCATTAAAGCCGAGCTGCT
CACCGGCGGTGAAGACTTCAAAGTGCAGGCGGCCAAAATGCGCAAGAACCCGGAAATTCTTATTGGCACCCCGGGGCGCC
TCATCGAGCATCTAGATGCCGGCAACCTGCTTTTGCAGGATCTGGAAATGCTGGTGTTGGATGAATCCGATCGCATGCTC
GACATGGGCTTCAACGACGACGTGCTGCGCCTGGCCGCGGAATGCCGGCCCGAGCGGCAGACCCTGTTGTTCTCCGCCAC
CACGGGCGGTAACGCCATGGAAAACATGATCAGCAGTGTGCTTCGCGACCCCCGCTCGCTGGTGCTCGATTCCGTGCGTG
ACCTGAATGAATCTGTGAGCCAGCAGATCATCACTGCCGACGATGTGAAGCACAAAGAACGGTTAGTGCAATGGCTGCTA
GCCAATGAAACCTATGATAAAGCGGTAGTGTTCACCAATACCCGTGAACAAGCCGATCGGCTTTGCGGTGTGCTGGTGGC
CTCTAACCTGAAAGTGTTTGTGCTGCACGGCGAGAAAGATCAGAAAGATCGCAAGCTGGCCATGGATCGTCTTAAAACCG
GCGCCGTGAAAGTGCTGGTCGCCACAGACGTGGCTGCCCGAGGTATCCACGTGGATAACCTGGACTTGGTGATCAACTTC
GACATGCCTCGCAGTGGCGACGAGTACGTGCATCGTATTGGTCGCACCGGGCGAGTGGGGGGGGAAGGCACCGCAATTTC
CCTGATTGCCGCCCACGAATGGAATTTGATGGCGAGTATTCAACGTTACCTGCGTCAAAATTTTGAATACCGCTTGGTGG
AAGCCCTGCGGGGCAACTTCCTGGGGCCGAAAAACCTGAAATCCAACGGTAAGGCTGCCGGTAATAAAAAGAAAAAAATG
AAGAAAAAAGAAGATGCTAAAAAAGGTATCAAGAAATCCGGAGCCAAGAAAAACGCCGCTAAACCCAAGCGCAATGCCAG
GCCGCCGAGCCAAGACACCAAAGGCGGGTTTGCCACAGTGAAGCGCAAAAAGACCCCCGGTCCCCTAGATTGA

Upstream 100 bases:

>100_bases
GGCCCGGGTTGCACCGATCACTGTGTTTCCACGTTTAACGGTGAACTTTCAACGGCTCTGGATGCTACAATGTTCGCCTT
ATTCATGGAGTTAGCCTGTT

Downstream 100 bases:

>100_bases
TAACGTAACTAGATTGAGAGCGTGAAAAGGCACTACGCCTAGCATCGTTTTATAAATCCAAGAGGCCGCGCCCTAAAAAT
TGAGCGCGGCCTTTTTTGTT

Product: DEAD-box ATP dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPMLHQLLQYSRPRTDTRALILL
PTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIEHLDAGNLLLQDLEMLVLDESDRML
DMGFNDDVLRLAAECRPERQTLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDVKHKERLVQWLL
ANETYDKAVVFTNTREQADRLCGVLVASNLKVFVLHGEKDQKDRKLAMDRLKTGAVKVLVATDVAARGIHVDNLDLVINF
DMPRSGDEYVHRIGRTGRVGGEGTAISLIAAHEWNLMASIQRYLRQNFEYRLVEALRGNFLGPKNLKSNGKAAGNKKKKM
KKKEDAKKGIKKSGAKKNAAKPKRNARPPSQDTKGGFATVKRKKTPGPLD

Sequences:

>Translated_450_residues
MSSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPMLHQLLQYSRPRTDTRALILL
PTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIEHLDAGNLLLQDLEMLVLDESDRML
DMGFNDDVLRLAAECRPERQTLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDVKHKERLVQWLL
ANETYDKAVVFTNTREQADRLCGVLVASNLKVFVLHGEKDQKDRKLAMDRLKTGAVKVLVATDVAARGIHVDNLDLVINF
DMPRSGDEYVHRIGRTGRVGGEGTAISLIAAHEWNLMASIQRYLRQNFEYRLVEALRGNFLGPKNLKSNGKAAGNKKKKM
KKKEDAKKGIKKSGAKKNAAKPKRNARPPSQDTKGGFATVKRKKTPGPLD
>Mature_449_residues
SSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPMLHQLLQYSRPRTDTRALILLP
TRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIEHLDAGNLLLQDLEMLVLDESDRMLD
MGFNDDVLRLAAECRPERQTLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDVKHKERLVQWLLA
NETYDKAVVFTNTREQADRLCGVLVASNLKVFVLHGEKDQKDRKLAMDRLKTGAVKVLVATDVAARGIHVDNLDLVINFD
MPRSGDEYVHRIGRTGRVGGEGTAISLIAAHEWNLMASIQRYLRQNFEYRLVEALRGNFLGPKNLKSNGKAAGNKKKKMK
KKEDAKKGIKKSGAKKNAAKPKRNARPPSQDTKGGFATVKRKKTPGPLD

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=39.8891966759003, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=37.3297002724796, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=37.3297002724796, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI222352149, Length=393, Percent_Identity=35.6234096692112, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=36.056338028169, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=36.056338028169, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=37.2881355932203, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=35.8904109589041, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI31542656, Length=389, Percent_Identity=34.4473007712082, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=37.0879120879121, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=37.0879120879121, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI169881239, Length=375, Percent_Identity=34.4, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI13514809, Length=375, Percent_Identity=34.4, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI301171467, Length=375, Percent_Identity=34.6666666666667, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI87196351, Length=375, Percent_Identity=34.6666666666667, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI301171475, Length=375, Percent_Identity=34.6666666666667, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI262231852, Length=371, Percent_Identity=36.9272237196765, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI216548263, Length=371, Percent_Identity=36.9272237196765, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI13518015, Length=371, Percent_Identity=36.9272237196765, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI262118318, Length=371, Percent_Identity=36.9272237196765, Blast_Score=218, Evalue=6e-57,
Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=34.5360824742268, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=33.8753387533875, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI188035877, Length=404, Percent_Identity=34.9009900990099, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI21071032, Length=371, Percent_Identity=33.9622641509434, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=32.409972299169, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=35.3276353276353, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=33.7837837837838, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=34.2465753424658, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=33.6927223719677, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=33.5195530726257, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI17505907, Length=423, Percent_Identity=33.5697399527187, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI38327634, Length=374, Percent_Identity=33.1550802139037, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=32.3369565217391, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI38569503, Length=368, Percent_Identity=32.3369565217391, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=31.758530183727, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=31.6062176165803, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=28.2967032967033, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI9506931, Length=429, Percent_Identity=29.1375291375291, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=30.3116147308782, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=30.3116147308782, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=29.5454545454545, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI41327779, Length=385, Percent_Identity=32.4675324675325, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=28.1420765027322, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=30.7511737089202, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=31.25, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=30.8988764044944, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=30.9734513274336, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=31.4861460957179, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI20336298, Length=302, Percent_Identity=35.0993377483444, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=28.7878787878788, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=28.9017341040462, Blast_Score=130, Evalue=4e-30,
Organism=Escherichia coli, GI1788930, Length=386, Percent_Identity=41.4507772020725, Blast_Score=269, Evalue=2e-73,
Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=37.6693766937669, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1787605, Length=358, Percent_Identity=43.0167597765363, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI87082221, Length=366, Percent_Identity=37.9781420765027, Blast_Score=238, Evalue=5e-64,
Organism=Escherichia coli, GI1790214, Length=368, Percent_Identity=36.4130434782609, Blast_Score=221, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=374, Percent_Identity=35.8288770053476, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=39.0243902439024, Blast_Score=227, Evalue=9e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=371, Percent_Identity=35.8490566037736, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17510559, Length=408, Percent_Identity=33.8235294117647, Blast_Score=225, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=36.4829396325459, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=330, Percent_Identity=37.2727272727273, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=387, Percent_Identity=35.4005167958656, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71999644, Length=387, Percent_Identity=35.4005167958656, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17510309, Length=344, Percent_Identity=36.6279069767442, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=344, Percent_Identity=36.6279069767442, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=344, Percent_Identity=36.6279069767442, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=34.435261707989, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=33.8541666666667, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=34.1597796143251, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=33.5135135135135, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=32.8840970350404, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=32.972972972973, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=31.8059299191375, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=31.8059299191375, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=31.4363143631436, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=378, Percent_Identity=34.3915343915344, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17537549, Length=365, Percent_Identity=37.8082191780822, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17509811, Length=363, Percent_Identity=33.0578512396694, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=33.048433048433, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=28.8828337874659, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=414, Percent_Identity=30.6763285024155, Blast_Score=174, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=30.4, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17505370, Length=373, Percent_Identity=31.9034852546917, Blast_Score=168, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=29.1784702549575, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=30.7291666666667, Blast_Score=162, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.9973045822102, Blast_Score=157, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=387, Percent_Identity=30.2325581395349, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=25.6470588235294, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=338, Percent_Identity=30.4733727810651, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI71997889, Length=474, Percent_Identity=27.0042194092827, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17536099, Length=413, Percent_Identity=29.0556900726392, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17536101, Length=399, Percent_Identity=29.3233082706767, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17536103, Length=399, Percent_Identity=29.3233082706767, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=25.8953168044077, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=28.0966767371601, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17557982, Length=395, Percent_Identity=25.0632911392405, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71982862, Length=189, Percent_Identity=32.2751322751323, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=37.1428571428571, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=37.3297002724796, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=35.2631578947368, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6324778, Length=383, Percent_Identity=34.2036553524804, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=384, Percent_Identity=36.1979166666667, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=34.453781512605, Blast_Score=216, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6320449, Length=395, Percent_Identity=34.1772151898734, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=32.6027397260274, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6320173, Length=416, Percent_Identity=32.2115384615385, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=31.830985915493, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=34.0482573726542, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=34.0720221606648, Blast_Score=193, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6321360, Length=348, Percent_Identity=34.7701149425287, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6323947, Length=373, Percent_Identity=33.2439678284182, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6319714, Length=444, Percent_Identity=30.8558558558559, Blast_Score=183, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=372, Percent_Identity=30.3763440860215, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=30.188679245283, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=30.188679245283, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=30.5912596401028, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=383, Percent_Identity=32.8981723237598, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=348, Percent_Identity=31.8965517241379, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320119, Length=380, Percent_Identity=28.1578947368421, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=428, Percent_Identity=27.3364485981308, Blast_Score=150, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=27.1634615384615, Blast_Score=144, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.4367816091954, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6322876, Length=177, Percent_Identity=35.0282485875706, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21356161, Length=379, Percent_Identity=36.6754617414248, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24584399, Length=357, Percent_Identity=36.9747899159664, Blast_Score=234, Evalue=9e-62,
Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=35.7723577235772, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=36.5384615384615, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24585582, Length=449, Percent_Identity=33.630289532294, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=35.2112676056338, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI17985987, Length=382, Percent_Identity=35.0785340314136, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=34.0782122905028, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=34.0782122905028, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=36.8571428571429, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24584994, Length=397, Percent_Identity=33.7531486146096, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=35.7340720221607, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI28575014, Length=374, Percent_Identity=32.8877005347594, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17136814, Length=365, Percent_Identity=35.8904109589041, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=34.9030470914127, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=32.5068870523416, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=32.6975476839237, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=32.6975476839237, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=32.6975476839237, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=32.6975476839237, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24642822, Length=409, Percent_Identity=32.7628361858191, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24583281, Length=353, Percent_Identity=30.3116147308782, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI28571338, Length=447, Percent_Identity=31.3199105145414, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI18859659, Length=447, Percent_Identity=31.3199105145414, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24583279, Length=353, Percent_Identity=30.3116147308782, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI28571808, Length=375, Percent_Identity=32.5333333333333, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI28571809, Length=375, Percent_Identity=32.5333333333333, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281365720, Length=295, Percent_Identity=34.9152542372881, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=32.2222222222222, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.08356545961, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24643725, Length=410, Percent_Identity=28.2926829268293, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI20130173, Length=471, Percent_Identity=26.3269639065817, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=28.4507042253521, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=28.4507042253521, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=28.4507042253521, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI21355559, Length=352, Percent_Identity=35.5113636363636, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI17136666, Length=425, Percent_Identity=28.9411764705882, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.2752293577982, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=30.2521008403361, Blast_Score=122, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24640164, Length=379, Percent_Identity=23.7467018469657, Blast_Score=114, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49898; Mature: 49767

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPM
CCCCCCCCHHHHHHHHHCCEEECCCCCCHHHCCCCEECCCCEEEEEECCCCCHHHHHHHH
LHQLLQYSRPRTDTRALILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKM
HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEHHHH
RKNPEILIGTPGRLIEHLDAGNLLLQDLEMLVLDESDRMLDMGFNDDVLRLAAECRPERQ
CCCCCEEEECCHHHHHHCCCCHHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHCCCCCE
TLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDVKHKERLVQWLL
EEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ANETYDKAVVFTNTREQADRLCGVLVASNLKVFVLHGEKDQKDRKLAMDRLKTGAVKVLV
HCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
ATDVAARGIHVDNLDLVINFDMPRSGDEYVHRIGRTGRVGGEGTAISLIAAHEWNLMASI
EECHHHCCEEECCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHH
QRYLRQNFEYRLVEALRGNFLGPKNLKSNGKAAGNKKKKMKKKEDAKKGIKKSGAKKNAA
HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KPKRNARPPSQDTKGGFATVKRKKTPGPLD
CCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPM
CCCCCCCHHHHHHHHHCCEEECCCCCCHHHCCCCEECCCCEEEEEECCCCCHHHHHHHH
LHQLLQYSRPRTDTRALILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKM
HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEHHHH
RKNPEILIGTPGRLIEHLDAGNLLLQDLEMLVLDESDRMLDMGFNDDVLRLAAECRPERQ
CCCCCEEEECCHHHHHHCCCCHHHHHHHHHHEECCCCCEEECCCCHHHHHHHHHCCCCCE
TLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDVKHKERLVQWLL
EEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ANETYDKAVVFTNTREQADRLCGVLVASNLKVFVLHGEKDQKDRKLAMDRLKTGAVKVLV
HCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
ATDVAARGIHVDNLDLVINFDMPRSGDEYVHRIGRTGRVGGEGTAISLIAAHEWNLMASI
EECHHHCCEEECCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHH
QRYLRQNFEYRLVEALRGNFLGPKNLKSNGKAAGNKKKKMKKKEDAKKGIKKSGAKKNAA
HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
KPKRNARPPSQDTKGGFATVKRKKTPGPLD
CCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]