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The map label for this gene is pqiA [H]

Identifier: 110835268

GI number: 110835268

Start: 2727907

End: 2728557

Strand: Reverse

Name: pqiA [H]

Synonym: ABO_2407

Alternate gene names: 110835268

Gene position: 2728557-2727907 (Counterclockwise)

Preceding gene: 110835269

Following gene: 110835267

Centisome position: 87.45

GC content: 58.68

Gene sequence:

>651_bases
GTGTCCGAGCTTAGGGGAGGGGAGTTGATGTCTACTGATGCGTTGCAGTGCCCGGATTGCGGTACTCAGCTTGCTGCGCC
TTCCCAGCCCCAGCGCGCCCGTGGCACATGGCGCTGCCCTCGCTGCGAGTGCCAGTTAAGTGGCGCCTGGACCTTGCGCC
CAGATTCTTTGCTTGCGCTAACGGTGACCACCTCTGTGTTGTGGTTGCCCGCCCTGATTCTGCCGTTAATGCGTTTGGAA
AACCTGGGCTTGGACCGTGAAGCCAGCCTGCTGGATTGTGTACTGCGCCTCATGCAAGGCATCTACCTTCCGGTGGGCCT
ATTGCTGCTGTTTACCCTGGTGCTTATGCCGCTGTTAAATTTATTGTCAGTGGGGCGTCTGTTATGGGCGGCCCGTACCG
ATACGCCTGCGGCGACATCGCTAGCTCCGTTTTGGATGAAGGCGTATCGGCACAGCCGGGAATGGGCGATGACGGATATT
TTTCTGCTCGGCATTCTTATCGCCATGACCAAGCTGGGTGATATGGCCACAGTGACCCCCGGTGCGGGCTTGTTCTGCTT
GGTGGTGGCGGTGTTGTTGCGTCTTATTGTGGAAACCTTGGCACAACCGGATCAGCTGCAACGGCTGCTGGAGGCACGGC
ATGGCCACTGA

Upstream 100 bases:

>100_bases
TTAAACGGGGTTTATAAAACCCCGTAAAATTCCGCCTCTCGTTCACGTTCTTTCCGCACAGGGGAAGGCATTCTGGTACG
GTTATTGGCTGGAGCTAGCG

Downstream 100 bases:

>100_bases
GGCGACCCCAGGCCATCGGCCATTGGCCTGGGCATTATTGATCGCGGCTGTGGTGTGGCTGGTGCCCGCAAATTTGCTGC
CCATCATGACCGTTATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSELRGGELMSTDALQCPDCGTQLAAPSQPQRARGTWRCPRCECQLSGAWTLRPDSLLALTVTTSVLWLPALILPLMRLE
NLGLDREASLLDCVLRLMQGIYLPVGLLLLFTLVLMPLLNLLSVGRLLWAARTDTPAATSLAPFWMKAYRHSREWAMTDI
FLLGILIAMTKLGDMATVTPGAGLFCLVVAVLLRLIVETLAQPDQLQRLLEARHGH

Sequences:

>Translated_216_residues
MSELRGGELMSTDALQCPDCGTQLAAPSQPQRARGTWRCPRCECQLSGAWTLRPDSLLALTVTTSVLWLPALILPLMRLE
NLGLDREASLLDCVLRLMQGIYLPVGLLLLFTLVLMPLLNLLSVGRLLWAARTDTPAATSLAPFWMKAYRHSREWAMTDI
FLLGILIAMTKLGDMATVTPGAGLFCLVVAVLLRLIVETLAQPDQLQRLLEARHGH
>Mature_215_residues
SELRGGELMSTDALQCPDCGTQLAAPSQPQRARGTWRCPRCECQLSGAWTLRPDSLLALTVTTSVLWLPALILPLMRLEN
LGLDREASLLDCVLRLMQGIYLPVGLLLLFTLVLMPLLNLLSVGRLLWAARTDTPAATSLAPFWMKAYRHSREWAMTDIF
LLGILIAMTKLGDMATVTPGAGLFCLVVAVLLRLIVETLAQPDQLQRLLEARHGH

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788137, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 23814; Mature: 23683

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELRGGELMSTDALQCPDCGTQLAAPSQPQRARGTWRCPRCECQLSGAWTLRPDSLLAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCEEECCCCCHHH
TVTTSVLWLPALILPLMRLENLGLDREASLLDCVLRLMQGIYLPVGLLLLFTLVLMPLLN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSVGRLLWAARTDTPAATSLAPFWMKAYRHSREWAMTDIFLLGILIAMTKLGDMATVTP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECC
GAGLFCLVVAVLLRLIVETLAQPDQLQRLLEARHGH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SELRGGELMSTDALQCPDCGTQLAAPSQPQRARGTWRCPRCECQLSGAWTLRPDSLLAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCEEECCCCCHHH
TVTTSVLWLPALILPLMRLENLGLDREASLLDCVLRLMQGIYLPVGLLLLFTLVLMPLLN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSVGRLLWAARTDTPAATSLAPFWMKAYRHSREWAMTDIFLLGILIAMTKLGDMATVTP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECC
GAGLFCLVVAVLLRLIVETLAQPDQLQRLLEARHGH
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]