| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835216
Identifier: 110835216
GI number: 110835216
Start: 2680408
End: 2680767
Strand: Direct
Name: 110835216
Synonym: ABO_2355
Alternate gene names: NA
Gene position: 2680408-2680767 (Clockwise)
Preceding gene: 110835215
Following gene: 110835217
Centisome position: 85.91
GC content: 55.28
Gene sequence:
>360_bases ATGAGTCTTCTCGTCAATCTTGTCGGCCTGATTTTGATGGCCCTGGTGGTCTGGTGGTTCTGGCTATCGCACCGTAAAAA CTCCGCGCAAGCCACCACGCAAGAAGCCACCATTATCGTCGAAGACGGAGTCTACACCCCAGCATCCATTCGCGCTAAAA GCGGGCAGTCTCTGACACTGCATTTCGATCGGCGCGACCCCTCTCCCTGTGCCGAACAGGTGATCTTTCAGGGGCTCGAT ACCAGTGCATTTCTGGAAACCGGAAAAACCACCACCCTAACGCTGGATAACGTGCCCGCCGGGGAGCACCGCTTCACCTG CCAAATGCAGATGTATCAGGGCACACTGATCGTCGAATAA
Upstream 100 bases:
>100_bases CGCTGCACACCTTCGCCGAAGACAGCGTCGATGTGCTCGGCGAGACCATGCACAAACAGTCGGTAATACTCACCGCTCGC AAACCCCAGGAGGCGACACC
Downstream 100 bases:
>100_bases TCGCGGCCCAATCCCCCCAACTGGGGGGTGCATTAACAACGAAGGAAACGATGATGAAATACTTGCTCACACTCTTCACC GCTCTATTGCTGGCCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSLLVNLVGLILMALVVWWFWLSHRKNSAQATTQEATIIVEDGVYTPASIRAKSGQSLTLHFDRRDPSPCAEQVIFQGLD TSAFLETGKTTTLTLDNVPAGEHRFTCQMQMYQGTLIVE
Sequences:
>Translated_119_residues MSLLVNLVGLILMALVVWWFWLSHRKNSAQATTQEATIIVEDGVYTPASIRAKSGQSLTLHFDRRDPSPCAEQVIFQGLD TSAFLETGKTTTLTLDNVPAGEHRFTCQMQMYQGTLIVE >Mature_118_residues SLLVNLVGLILMALVVWWFWLSHRKNSAQATTQEATIIVEDGVYTPASIRAKSGQSLTLHFDRRDPSPCAEQVIFQGLDT SAFLETGKTTTLTLDNVPAGEHRFTCQMQMYQGTLIVE
Specific function: Unknown
COG id: COG4633
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13258; Mature: 13127
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVNLVGLILMALVVWWFWLSHRKNSAQATTQEATIIVEDGVYTPASIRAKSGQSLTL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEE HFDRRDPSPCAEQVIFQGLDTSAFLETGKTTTLTLDNVPAGEHRFTCQMQMYQGTLIVE EECCCCCCHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEEECCEEEEC >Mature Secondary Structure SLLVNLVGLILMALVVWWFWLSHRKNSAQATTQEATIIVEDGVYTPASIRAKSGQSLTL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEE HFDRRDPSPCAEQVIFQGLDTSAFLETGKTTTLTLDNVPAGEHRFTCQMQMYQGTLIVE EECCCCCCHHHHHHHHCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA