| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835215
Identifier: 110835215
GI number: 110835215
Start: 2679758
End: 2680411
Strand: Direct
Name: 110835215
Synonym: ABO_2354
Alternate gene names: NA
Gene position: 2679758-2680411 (Clockwise)
Preceding gene: 110835214
Following gene: 110835216
Centisome position: 85.89
GC content: 57.95
Gene sequence:
>654_bases ATGAGCCCGGAGCAACTTGCCGCACAACTGCGCCACCCTAACGGTGAAGATGGCAACAAAGTCGCAGACAATATGGACGT GCGAAACCGCCCTGTGATTCTCGCCGCCTACCAGGCGTTGGCCCCTGCTAACGGCGACCGGATTCTGGAAGTCGGGCCGG GAAGCGCAGGCCATCTCCCTCGCTTATTAGCGCAGGCTAACAACCTGCACTACACCGGATTAGATGCCTCTCGGGATATG GTCTTGCGTGCCCGCGAACGTTACCTAGGCGAAACTCGCGCTGCCTTCATCCACGGCGAACTGACGCAAGCACCACTTGC TCCTGCCAGTATGGACCGCATCGTTGCCATAAATGTGGTCTATTTCTGGCAGCCACTGCTCCCTGCTCTGCAAGTGCTGA ATTTGTTATTACGCCCCGGCGGCACTCTGGTGCTGGGCTTTCGCGATCACAACAGTATGGCCAGCTTGGCGGTGTTCAAA CACGGTTTTTCCACCTATCACGGCCCCGAGTTACAGCAGGCCCTAGAACAAGCCCACTTTACCAACACCCCGCTGCACAC CTTCGCCGAAGACAGCGTCGATGTGCTCGGCGAGACCATGCACAAACAGTCGGTAATACTCACCGCTCGCAAACCCCAGG AGGCGACACCATGA
Upstream 100 bases:
>100_bases TGATCGCCGGGGCCGCGATGTCGCTCAGCTCGGTTACCGTCGTCACCAACGCCAACCGATTGCGGTTTTTCAAACCCAAA CACCATCAGGGAACAAGCGC
Downstream 100 bases:
>100_bases GTCTTCTCGTCAATCTTGTCGGCCTGATTTTGATGGCCCTGGTGGTCTGGTGGTTCTGGCTATCGCACCGTAAAAACTCC GCGCAAGCCACCACGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase Domain Family; SAM Dependent Methyltransferase YrrH
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSPEQLAAQLRHPNGEDGNKVADNMDVRNRPVILAAYQALAPANGDRILEVGPGSAGHLPRLLAQANNLHYTGLDASRDM VLRARERYLGETRAAFIHGELTQAPLAPASMDRIVAINVVYFWQPLLPALQVLNLLLRPGGTLVLGFRDHNSMASLAVFK HGFSTYHGPELQQALEQAHFTNTPLHTFAEDSVDVLGETMHKQSVILTARKPQEATP
Sequences:
>Translated_217_residues MSPEQLAAQLRHPNGEDGNKVADNMDVRNRPVILAAYQALAPANGDRILEVGPGSAGHLPRLLAQANNLHYTGLDASRDM VLRARERYLGETRAAFIHGELTQAPLAPASMDRIVAINVVYFWQPLLPALQVLNLLLRPGGTLVLGFRDHNSMASLAVFK HGFSTYHGPELQQALEQAHFTNTPLHTFAEDSVDVLGETMHKQSVILTARKPQEATP >Mature_216_residues SPEQLAAQLRHPNGEDGNKVADNMDVRNRPVILAAYQALAPANGDRILEVGPGSAGHLPRLLAQANNLHYTGLDASRDMV LRARERYLGETRAAFIHGELTQAPLAPASMDRIVAINVVYFWQPLLPALQVLNLLLRPGGTLVLGFRDHNSMASLAVFKH GFSTYHGPELQQALEQAHFTNTPLHTFAEDSVDVLGETMHKQSVILTARKPQEATP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23748; Mature: 23617
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEQLAAQLRHPNGEDGNKVADNMDVRNRPVILAAYQALAPANGDRILEVGPGSAGHLP CCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCCCHHH RLLAQANNLHYTGLDASRDMVLRARERYLGETRAAFIHGELTQAPLAPASMDRIVAINVV HHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEHHH YFWQPLLPALQVLNLLLRPGGTLVLGFRDHNSMASLAVFKHGFSTYHGPELQQALEQAHF HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC TNTPLHTFAEDSVDVLGETMHKQSVILTARKPQEATP CCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCC >Mature Secondary Structure SPEQLAAQLRHPNGEDGNKVADNMDVRNRPVILAAYQALAPANGDRILEVGPGSAGHLP CHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCCCHHH RLLAQANNLHYTGLDASRDMVLRARERYLGETRAAFIHGELTQAPLAPASMDRIVAINVV HHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEHHH YFWQPLLPALQVLNLLLRPGGTLVLGFRDHNSMASLAVFKHGFSTYHGPELQQALEQAHF HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC TNTPLHTFAEDSVDVLGETMHKQSVILTARKPQEATP CCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA