| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ptsP [H]
Identifier: 110835209
GI number: 110835209
Start: 2671524
End: 2673797
Strand: Reverse
Name: ptsP [H]
Synonym: ABO_2348
Alternate gene names: 110835209
Gene position: 2673797-2671524 (Counterclockwise)
Preceding gene: 110835210
Following gene: 110835207
Centisome position: 85.69
GC content: 56.07
Gene sequence:
>2274_bases ATGCTTGATACTCTTCGACGTATTGTTCAGGAAGTGAACAACGCGGCGGATATCCCCAGCGCGCTGGACTTGATGGCCAA GCGGGTACGCGATGCCATGGGTACAGAAGTGTGTTCAATCTACCTGCGTGATGAGGAAGAGCAGCGCTATATGCTGATGG CCTCGGAAGGGTTGAAGCGCGAGGCAGTGGGTAAGGTGAGCTTGGGCTTGTCGGAGGGCCTAGTGGGGCAGGTTGGTTTG CGTGAAGAGCCCATCAACCTGGAAGATGCCTTTACCCACCCCAAATTTCATTACCTGGCGGGAACCGGGGAAGATGCGTT CCACGCTTTCCTGGGCGTGCCGGTGATGCACCATGGCAAGGTGCTGGGGATCATGGTGGTTCAGCAGCGCGATGTGCGCC GCTTTGACCAGAGTGAAGAAGCCTTCCTGGTGACTATTTCTGCCCAATTATCAGCGGTGATTGCTCATGCCCATGCCTCG GGTGTGCTATTTGACCAGCTGGGTGGCGGCGCGGATCTTCCTAGTTTTTACGACGGGCTGCCGGGGTGCCCTGGCGCGGC TATTGGTTACGGCGTTCTGTTGTTTCCCGAGGCGGATTTGGCGTCGGTGCCGGACCGAGACGTTGAGGATGTGAGCGAAG AAATTTCCCGCTTGGACGATGCCCTGGTACGGGTGCGTCAGGAAATTCGTGATTTGGCCGAGCGGGCTTCCCGATCTCTG GGGGCTGAAGAGCAGGCGCTGTTTGATGTGTACCTGCGCATGCTGGACCGTCATGCTTTGCCCGCGGAAGTTATTGCGGC CATTCGTGAAGGGCAGTGGGCCCAGGGTGCGTTACGTACAGTGATCGATGTCCACGTGCATAATTTCGAAATGATGGACG ATCCGTACCTGCGTGAGCGAGCTGCAGACGTGCGTGATTTGGGCCGCCGAGTGCTGGCTCAGCTGCAAAGCCAAACTCGC CGCCATATTATTTTTCCAGATGAATGCATTCTGCTCGGTGAAGATATTTCCGCTCCCATGTTGATGGAAGTGCCCCGTGA ACGGGTGCGCGGGATTGTTACTACCCGTGGCTCGCGCAATTCGCATATGGCCATTGTTGCGAGAGCTATGGGCATTCCCA CGGTGGTGGGTGCGCAGAATTTGCCGCTGAAAAAAATGGATGATAAGGAAATCATCGTTGATGGTTTTCGAGGGCGGGTG GTGGCCAATGCCTCGGCGGAGCTTAAACAGCAGTTCCAGGAAATTATCGCAGAGGAAGAGAGCCTCCAGGCGGGTTTAGA AAAGCTGCGTGACGAGCCAGCGCAAACCTTGGACGGTACGCGCATCACGTTGCAAGTGAATACTGGGTTGATGACCGATA TCAACCGGTCACTGGAACGGGGCGCGGAAGGGGTGGGCCTGTACCGGACGGAAATTCCATTTATGGTTCGTGACCGGTTT CCGTCGGAAGAAGAGCAACGAGTGATTTATCGCGAGCAGCTGGCGGCATTTGCTCCGCACTCGGTGACCATGCGCACCCT GGATATCGGGGGCGATAAGTCGCTGAGTTATTTCCCTATAGAGGATGAAAACCCTTTTCTGGGCTGGCGCGGCATCCGTG TCACCCTAGATCATCCGGAAATTTTCATGGTGCAGGTGCGTGCCATGATCAAAGCCAGTGAAGGCCTGGACAATCTGCGC ATTATGCTGCCCATGATTACCAGCGTGATTGAAGCGGAAGAAGCGCAACACCTGATCCATCGTGCTTGGCTTGAGGTTCG TGACGAGGGGTTGGATGTATCCATGCCGCCGGTGGGTGTGATGATCGAAGTGCCGGCCTCGGTGTACCAGGCTCGGGCGC TGGCCCAACGGGTGGATTTTTTGTCCGTTGGCACCAATGACCTGACCCAATACCTGTTGGCGGTGGACCGCAACAACCGG CAGGTGGCATCACTCTATAATTCCTATCACCCGGCGGTCCTGCATGCATTGATGCATGTGGTAGAGCAGGCTCGAGAAGA ACACACTCCCGTGTCAGTTTGTGGTGAGATGGCAGGGGAGCCTAGCGCCGCCCTGCTGTTAATGGCCATGGGGGTGGATG TGCTGTCCATGAATGCGTCCAACCTGTTGAAGGTAAAAGCCGCTATTCGGCAAGTGGATATCAGCTTTGTTCGCCGCCTT CTCAATGAAGTGCTGGCCATGGATAACGGTGAAGTAATCGGTTCTTACGTGGATCTACAGCTCACCAAGGCTGGTCTTGG CGAGCTGTTGCGAAATCGAAAGGTGCTGGCCTGA
Upstream 100 bases:
>100_bases CGTGGGGTCTATGCCCGAGCGTTGCGGGAATTAGCGCCGGCTCTGAAGAAAGGAAAGCGTACTCCTCATACTAATCAGAC TGTGCCTGGAGACTCACCCG
Downstream 100 bases:
>100_bases TGCGAACGCTATGCATATCGACCAATTAAATAAAACTAATCGAGAGAGCGTCATGACCGGCACCTCTCGTTGCGCTTTAT CGATAGATGGGCACGCTCCT
Product: phosphoenolpyruvate-protein phosphotransferase
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MLDTLRRIVQEVNNAADIPSALDLMAKRVRDAMGTEVCSIYLRDEEEQRYMLMASEGLKREAVGKVSLGLSEGLVGQVGL REEPINLEDAFTHPKFHYLAGTGEDAFHAFLGVPVMHHGKVLGIMVVQQRDVRRFDQSEEAFLVTISAQLSAVIAHAHAS GVLFDQLGGGADLPSFYDGLPGCPGAAIGYGVLLFPEADLASVPDRDVEDVSEEISRLDDALVRVRQEIRDLAERASRSL GAEEQALFDVYLRMLDRHALPAEVIAAIREGQWAQGALRTVIDVHVHNFEMMDDPYLRERAADVRDLGRRVLAQLQSQTR RHIIFPDECILLGEDISAPMLMEVPRERVRGIVTTRGSRNSHMAIVARAMGIPTVVGAQNLPLKKMDDKEIIVDGFRGRV VANASAELKQQFQEIIAEEESLQAGLEKLRDEPAQTLDGTRITLQVNTGLMTDINRSLERGAEGVGLYRTEIPFMVRDRF PSEEEQRVIYREQLAAFAPHSVTMRTLDIGGDKSLSYFPIEDENPFLGWRGIRVTLDHPEIFMVQVRAMIKASEGLDNLR IMLPMITSVIEAEEAQHLIHRAWLEVRDEGLDVSMPPVGVMIEVPASVYQARALAQRVDFLSVGTNDLTQYLLAVDRNNR QVASLYNSYHPAVLHALMHVVEQAREEHTPVSVCGEMAGEPSAALLLMAMGVDVLSMNASNLLKVKAAIRQVDISFVRRL LNEVLAMDNGEVIGSYVDLQLTKAGLGELLRNRKVLA
Sequences:
>Translated_757_residues MLDTLRRIVQEVNNAADIPSALDLMAKRVRDAMGTEVCSIYLRDEEEQRYMLMASEGLKREAVGKVSLGLSEGLVGQVGL REEPINLEDAFTHPKFHYLAGTGEDAFHAFLGVPVMHHGKVLGIMVVQQRDVRRFDQSEEAFLVTISAQLSAVIAHAHAS GVLFDQLGGGADLPSFYDGLPGCPGAAIGYGVLLFPEADLASVPDRDVEDVSEEISRLDDALVRVRQEIRDLAERASRSL GAEEQALFDVYLRMLDRHALPAEVIAAIREGQWAQGALRTVIDVHVHNFEMMDDPYLRERAADVRDLGRRVLAQLQSQTR RHIIFPDECILLGEDISAPMLMEVPRERVRGIVTTRGSRNSHMAIVARAMGIPTVVGAQNLPLKKMDDKEIIVDGFRGRV VANASAELKQQFQEIIAEEESLQAGLEKLRDEPAQTLDGTRITLQVNTGLMTDINRSLERGAEGVGLYRTEIPFMVRDRF PSEEEQRVIYREQLAAFAPHSVTMRTLDIGGDKSLSYFPIEDENPFLGWRGIRVTLDHPEIFMVQVRAMIKASEGLDNLR IMLPMITSVIEAEEAQHLIHRAWLEVRDEGLDVSMPPVGVMIEVPASVYQARALAQRVDFLSVGTNDLTQYLLAVDRNNR QVASLYNSYHPAVLHALMHVVEQAREEHTPVSVCGEMAGEPSAALLLMAMGVDVLSMNASNLLKVKAAIRQVDISFVRRL LNEVLAMDNGEVIGSYVDLQLTKAGLGELLRNRKVLA >Mature_757_residues MLDTLRRIVQEVNNAADIPSALDLMAKRVRDAMGTEVCSIYLRDEEEQRYMLMASEGLKREAVGKVSLGLSEGLVGQVGL REEPINLEDAFTHPKFHYLAGTGEDAFHAFLGVPVMHHGKVLGIMVVQQRDVRRFDQSEEAFLVTISAQLSAVIAHAHAS GVLFDQLGGGADLPSFYDGLPGCPGAAIGYGVLLFPEADLASVPDRDVEDVSEEISRLDDALVRVRQEIRDLAERASRSL GAEEQALFDVYLRMLDRHALPAEVIAAIREGQWAQGALRTVIDVHVHNFEMMDDPYLRERAADVRDLGRRVLAQLQSQTR RHIIFPDECILLGEDISAPMLMEVPRERVRGIVTTRGSRNSHMAIVARAMGIPTVVGAQNLPLKKMDDKEIIVDGFRGRV VANASAELKQQFQEIIAEEESLQAGLEKLRDEPAQTLDGTRITLQVNTGLMTDINRSLERGAEGVGLYRTEIPFMVRDRF PSEEEQRVIYREQLAAFAPHSVTMRTLDIGGDKSLSYFPIEDENPFLGWRGIRVTLDHPEIFMVQVRAMIKASEGLDNLR IMLPMITSVIEAEEAQHLIHRAWLEVRDEGLDVSMPPVGVMIEVPASVYQARALAQRVDFLSVGTNDLTQYLLAVDRNNR QVASLYNSYHPAVLHALMHVVEQAREEHTPVSVCGEMAGEPSAALLLMAMGVDVLSMNASNLLKVKAAIRQVDISFVRRL LNEVLAMDNGEVIGSYVDLQLTKAGLGELLRNRKVLA
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=755, Percent_Identity=41.1920529801325, Blast_Score=561, Evalue=1e-161, Organism=Escherichia coli, GI1788756, Length=562, Percent_Identity=37.3665480427046, Blast_Score=349, Evalue=5e-97, Organism=Escherichia coli, GI48994992, Length=558, Percent_Identity=30.8243727598566, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI1788726, Length=429, Percent_Identity=33.1002331002331, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI1787994, Length=407, Percent_Identity=26.2899262899263, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 84016; Mature: 84016
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTLRRIVQEVNNAADIPSALDLMAKRVRDAMGTEVCSIYLRDEEEQRYMLMASEGLKR CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHCCCCH EAVGKVSLGLSEGLVGQVGLREEPINLEDAFTHPKFHYLAGTGEDAFHAFLGVPVMHHGK HHHCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHCCCHHHCCC VLGIMVVQQRDVRRFDQSEEAFLVTISAQLSAVIAHAHASGVLFDQLGGGADLPSFYDGL EEEEEEECHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCC PGCPGAAIGYGVLLFPEADLASVPDRDVEDVSEEISRLDDALVRVRQEIRDLAERASRSL CCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEEQALFDVYLRMLDRHALPAEVIAAIREGQWAQGALRTVIDVHVHNFEMMDDPYLRER CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCHHHHHH AADVRDLGRRVLAQLQSQTRRHIIFPDECILLGEDISAPMLMEVPRERVRGIVTTRGSRN HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCHHHHCCHHHHCEEEEECCCCC SHMAIVARAMGIPTVVGAQNLPLKKMDDKEIIVDGFRGRVVANASAELKQQFQEIIAEEE CCHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHH SLQAGLEKLRDEPAQTLDGTRITLQVNTGLMTDINRSLERGAEGVGLYRTEIPFMVRDRF HHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCEECCC PSEEEQRVIYREQLAAFAPHSVTMRTLDIGGDKSLSYFPIEDENPFLGWRGIRVTLDHPE CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECCCC IFMVQVRAMIKASEGLDNLRIMLPMITSVIEAEEAQHLIHRAWLEVRDEGLDVSMPPVGV CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MIEVPASVYQARALAQRVDFLSVGTNDLTQYLLAVDRNNRQVASLYNSYHPAVLHALMHV EEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH VEQAREEHTPVSVCGEMAGEPSAALLLMAMGVDVLSMNASNLLKVKAAIRQVDISFVRRL HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH LNEVLAMDNGEVIGSYVDLQLTKAGLGELLRNRKVLA HHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCC >Mature Secondary Structure MLDTLRRIVQEVNNAADIPSALDLMAKRVRDAMGTEVCSIYLRDEEEQRYMLMASEGLKR CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHCCCCH EAVGKVSLGLSEGLVGQVGLREEPINLEDAFTHPKFHYLAGTGEDAFHAFLGVPVMHHGK HHHCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHCCCHHHCCC VLGIMVVQQRDVRRFDQSEEAFLVTISAQLSAVIAHAHASGVLFDQLGGGADLPSFYDGL EEEEEEECHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCC PGCPGAAIGYGVLLFPEADLASVPDRDVEDVSEEISRLDDALVRVRQEIRDLAERASRSL CCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAEEQALFDVYLRMLDRHALPAEVIAAIREGQWAQGALRTVIDVHVHNFEMMDDPYLRER CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCHHHHHH AADVRDLGRRVLAQLQSQTRRHIIFPDECILLGEDISAPMLMEVPRERVRGIVTTRGSRN HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCCHHHHCCHHHHCEEEEECCCCC SHMAIVARAMGIPTVVGAQNLPLKKMDDKEIIVDGFRGRVVANASAELKQQFQEIIAEEE CCHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHH SLQAGLEKLRDEPAQTLDGTRITLQVNTGLMTDINRSLERGAEGVGLYRTEIPFMVRDRF HHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCEECCC PSEEEQRVIYREQLAAFAPHSVTMRTLDIGGDKSLSYFPIEDENPFLGWRGIRVTLDHPE CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEECCCC IFMVQVRAMIKASEGLDNLRIMLPMITSVIEAEEAQHLIHRAWLEVRDEGLDVSMPPVGV CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE MIEVPASVYQARALAQRVDFLSVGTNDLTQYLLAVDRNNRQVASLYNSYHPAVLHALMHV EEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH VEQAREEHTPVSVCGEMAGEPSAALLLMAMGVDVLSMNASNLLKVKAAIRQVDISFVRRL HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH LNEVLAMDNGEVIGSYVDLQLTKAGLGELLRNRKVLA HHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]