| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835199
Identifier: 110835199
GI number: 110835199
Start: 2664847
End: 2665059
Strand: Reverse
Name: 110835199
Synonym: ABO_2338
Alternate gene names: NA
Gene position: 2665059-2664847 (Counterclockwise)
Preceding gene: 110835204
Following gene: 110835198
Centisome position: 85.41
GC content: 43.66
Gene sequence:
>213_bases ATGACAATGATTCTCATATACGAAATGGAGGTCAGTATGTCTCAGCTAAAAAAGAACGTTACCACTACTACACGACAGGT CGCCATTAATGCTGAAAGTGCGGTGGCAAGCAGTCTGTTGCTCAACCATCAAGGCAAATTGTGGATTGAACATGCCGGTG AGCGTTACCAGTTGCGTCGTACGTCCAACAATAAACTGATTTTGACAAAGTGA
Upstream 100 bases:
>100_bases GTGAGACGGGGAGTGGGGCGGGGCAATGCCACTGCTGGTCATTGAAATGAGGTCTTGATCAGAAAATGAGAATCAGGCGT TGACGAACACCTAATCAATA
Downstream 100 bases:
>100_bases TGCGCCACGCGACATCAATAACAGGCCAATAATACGGCGGCTGCGTTATCCGTTTTAACGCTTTGCTCTCGCGCCAGTTC CTTTCAGCGTGTGAGCTGGG
Product: hemin uptake protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTMILIYEMEVSMSQLKKNVTTTTRQVAINAESAVASSLLLNHQGKLWIEHAGERYQLRRTSNNKLILTK
Sequences:
>Translated_70_residues MTMILIYEMEVSMSQLKKNVTTTTRQVAINAESAVASSLLLNHQGKLWIEHAGERYQLRRTSNNKLILTK >Mature_69_residues TMILIYEMEVSMSQLKKNVTTTTRQVAINAESAVASSLLLNHQGKLWIEHAGERYQLRRTSNNKLILTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8004; Mature: 7873
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMILIYEMEVSMSQLKKNVTTTTRQVAINAESAVASSLLLNHQGKLWIEHAGERYQLRR CEEEEEEEECCCHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCEEEEECCCEEEEEE TSNNKLILTK CCCCEEEEEC >Mature Secondary Structure TMILIYEMEVSMSQLKKNVTTTTRQVAINAESAVASSLLLNHQGKLWIEHAGERYQLRR EEEEEEEECCCHHHHHCCCCCCEEEEEEECHHHHHHHHHHCCCCCEEEEECCCEEEEEE TSNNKLILTK CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA