| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is folA [H]
Identifier: 110835204
GI number: 110835204
Start: 2667373
End: 2667888
Strand: Reverse
Name: folA [H]
Synonym: ABO_2343
Alternate gene names: 110835204
Gene position: 2667888-2667373 (Counterclockwise)
Preceding gene: 110835205
Following gene: 110835199
Centisome position: 85.51
GC content: 53.88
Gene sequence:
>516_bases ATGTTCATGTCCATTCGACTTTCCATGATGGTCGCCAAGGCCACTAATAATGTGATCGGGCGGAATAATAAGTTGCCCTG GTATTTGCCCAACGACTTGAAGTACTTCAAGCAGGTAACCTTCGGCAAGCCGGTGATCATGGGCCGCAAGACTTGGGAAT CACTGAAAGGCCCCCTGCCGGGTCGCACAAATATCGTGATTACCCGCCAGCCAGCGTATCAAGCTGAGGGCGCCAAGGTG GTGGCCACAGTGGATGACGCCATTACCATGGCAGAGAACGTGGCCTTCATTGAAGGCCAGGAAGAAGCGGTGATCATGGG CGGTGCGGAAATCTACGCGCTGGCGCTGGCGCAGACCCAGCGGCTCTACCTCACTGAGGTACATGCTGAGGTCGATGGGG ATACTTTTTTTCCGGAGTACGACAAGGGCGAATGGGAAGAAATTGCTCGTGAAGATTTCCCCGCTGAAGGGCCCAACCCC TACGATTATTCCTTTGTGGTATACGAACGCAAATGA
Upstream 100 bases:
>100_bases ATCAAAGCGCCGGTGGCAATCTAACGACTCCTCCCTGAAGCCGGATGCTCGATGCAACAGAGCTTTTGTCCGGCGTTAGG GGGTGGGTTCAAGCGTAGGT
Downstream 100 bases:
>100_bases GTTGAAAGTTTACACGCGTCCAAAGGTTGGGGGGGACCCTTACCCTAACCGATAGAGGCTACGCACTGAGCCTGGACGTG ACCTCTTTGTTTAGATGATT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MFMSIRLSMMVAKATNNVIGRNNKLPWYLPNDLKYFKQVTFGKPVIMGRKTWESLKGPLPGRTNIVITRQPAYQAEGAKV VATVDDAITMAENVAFIEGQEEAVIMGGAEIYALALAQTQRLYLTEVHAEVDGDTFFPEYDKGEWEEIAREDFPAEGPNP YDYSFVVYERK
Sequences:
>Translated_171_residues MFMSIRLSMMVAKATNNVIGRNNKLPWYLPNDLKYFKQVTFGKPVIMGRKTWESLKGPLPGRTNIVITRQPAYQAEGAKV VATVDDAITMAENVAFIEGQEEAVIMGGAEIYALALAQTQRLYLTEVHAEVDGDTFFPEYDKGEWEEIAREDFPAEGPNP YDYSFVVYERK >Mature_171_residues MFMSIRLSMMVAKATNNVIGRNNKLPWYLPNDLKYFKQVTFGKPVIMGRKTWESLKGPLPGRTNIVITRQPAYQAEGAKV VATVDDAITMAENVAFIEGQEEAVIMGGAEIYALALAQTQRLYLTEVHAEVDGDTFFPEYDKGEWEEIAREDFPAEGPNP YDYSFVVYERK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=149, Percent_Identity=34.8993288590604, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI28827793, Length=153, Percent_Identity=33.9869281045752, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1786233, Length=165, Percent_Identity=42.4242424242424, Blast_Score=143, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17505899, Length=177, Percent_Identity=29.9435028248588, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324810, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=3e-13, Organism=Drosophila melanogaster, GI116008026, Length=148, Percent_Identity=34.4594594594595, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647458, Length=148, Percent_Identity=34.4594594594595, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19352; Mature: 19352
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMSIRLSMMVAKATNNVIGRNNKLPWYLPNDLKYFKQVTFGKPVIMGRKTWESLKGPLP CEEEEEEEEEEEHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHCCCCC GRTNIVITRQPAYQAEGAKVVATVDDAITMAENVAFIEGQEEAVIMGGAEIYALALAQTQ CCCEEEEEECCCCCCCCCEEEEEECCHHHHHHCEEEEECCCCEEEEECHHEEEEEEHHCC RLYLTEVHAEVDGDTFFPEYDKGEWEEIAREDFPAEGPNPYDYSFVVYERK EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MFMSIRLSMMVAKATNNVIGRNNKLPWYLPNDLKYFKQVTFGKPVIMGRKTWESLKGPLP CEEEEEEEEEEEHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHCCCCC GRTNIVITRQPAYQAEGAKVVATVDDAITMAENVAFIEGQEEAVIMGGAEIYALALAQTQ CCCEEEEEECCCCCCCCCEEEEEECCHHHHHHCEEEEECCCCEEEEECHHEEEEEEHHCC RLYLTEVHAEVDGDTFFPEYDKGEWEEIAREDFPAEGPNPYDYSFVVYERK EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]