Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is tatA
Identifier: 110835111
GI number: 110835111
Start: 2570918
End: 2571157
Strand: Direct
Name: tatA
Synonym: ABO_2250
Alternate gene names: 110835111
Gene position: 2570918-2571157 (Clockwise)
Preceding gene: 110835110
Following gene: 110835112
Centisome position: 82.4
GC content: 51.67
Gene sequence:
>240_bases ATGTTTTCCGGTATCAGCATTTGGCAGCTATTGATTCTCCTGGCCATCGTGGTCCTGTTATTCGGCACGAAAAAACTACG CAACATCGGCGGTGATTTGGGCGGCGCGGTGAAAGGCTTCAAAAGCGCCATGAAAGATGGCGAAGACGAGCAGGACCATA AACGCTTGGCTGACGACGATCAGCCCCAGAATAAGCAAGACGCCGAGCAAAAAGCCGAACAGGAAAAGGACAAAGCCTGA
Upstream 100 bases:
>100_bases AACGACGTTTTGGCCTGTCCGGCCATGATGAGAAAGCCGCACGCAGCGGTAAGCACTAACGTAGCTAACGCGGCCCTTAA CTTTTTCGGAGAGAAATTCC
Downstream 100 bases:
>100_bases TAGCTGCCGCCCATTACCGGCGGCACAGCCTAGGCAAGATCCTGCCAAACCGAGGATACGATGTTCGATATCGGCTTTAC CGAACTCACCCTGATTTTCA
Product: sec-independent protein translocase protein tatA/E-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MFSGISIWQLLILLAIVVLLFGTKKLRNIGGDLGGAVKGFKSAMKDGEDEQDHKRLADDDQPQNKQDAEQKAEQEKDKA
Sequences:
>Translated_79_residues MFSGISIWQLLILLAIVVLLFGTKKLRNIGGDLGGAVKGFKSAMKDGEDEQDHKRLADDDQPQNKQDAEQKAEQEKDKA >Mature_79_residues MFSGISIWQLLILLAIVVLLFGTKKLRNIGGDLGGAVKGFKSAMKDGEDEQDHKRLADDDQPQNKQDAEQKAEQEKDKA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=84, Percent_Identity=50, Blast_Score=74, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_ALCBS (Q0VMA0)
Other databases:
- EMBL: AM286690 - RefSeq: YP_693970.1 - STRING: Q0VMA0 - GeneID: 4211986 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2250 - NMPDR: fig|393595.12.peg.2251 - eggNOG: NOG84601 - HOGENOM: HBG751935 - OMA: QKEGENV - BioCyc: ABOR393595:ABO_2250-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8741; Mature: 8741
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1307cb38)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSGISIWQLLILLAIVVLLFGTKKLRNIGGDLGGAVKGFKSAMKDGEDEQDHKRLADDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC QPQNKQDAEQKAEQEKDKA CCCCHHHHHHHHHHHHCCH >Mature Secondary Structure MFSGISIWQLLILLAIVVLLFGTKKLRNIGGDLGGAVKGFKSAMKDGEDEQDHKRLADDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC QPQNKQDAEQKAEQEKDKA CCCCHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA