Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is hisE
Identifier: 110835110
GI number: 110835110
Start: 2570541
End: 2570876
Strand: Direct
Name: hisE
Synonym: ABO_2249
Alternate gene names: 110835110
Gene position: 2570541-2570876 (Clockwise)
Preceding gene: 110835109
Following gene: 110835111
Centisome position: 82.39
GC content: 54.76
Gene sequence:
>336_bases ATGTCAGACATACTCAGTGAGCTGCATCAGGTTCTGGAGTCACGCAAGGGCGCCAATCCGGACAGCTCCTATGTGGCCAG CCTGTATGCCAAGGGCCTCAACAAAATCCTGGAAAAAGTCGGCGAAGAAGCGATAGAAACCATCCTTGCGGCCCGAGATG CGGAAGTCAGCGGCGAGCATCAGGCACTGATCAGCGAAACTGCCGATTTATGGTTCCACTCCCTGGTAATGTTGGCCAAA CTGGGCGAACACCCAGACAAAGTCCTGGCAGAACTACAACGACGTTTTGGCCTGTCCGGCCATGATGAGAAAGCCGCACG CAGCGGTAAGCACTAA
Upstream 100 bases:
>100_bases GCGCCGCTAGCAACAACACATCAGAAAAAAGAGCCTATGGCCCTTTTACGCACCCTGATAAACTCATCCCCCTGCCGGGT TGGGCAATAAGGAATACACT
Downstream 100 bases:
>100_bases CGTAGCTAACGCGGCCCTTAACTTTTTCGGAGAGAAATTCCATGTTTTCCGGTATCAGCATTTGGCAGCTATTGATTCTC CTGGCCATCGTGGTCCTGTT
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSDILSELHQVLESRKGANPDSSYVASLYAKGLNKILEKVGEEAIETILAARDAEVSGEHQALISETADLWFHSLVMLAK LGEHPDKVLAELQRRFGLSGHDEKAARSGKH
Sequences:
>Translated_111_residues MSDILSELHQVLESRKGANPDSSYVASLYAKGLNKILEKVGEEAIETILAARDAEVSGEHQALISETADLWFHSLVMLAK LGEHPDKVLAELQRRFGLSGHDEKAARSGKH >Mature_110_residues SDILSELHQVLESRKGANPDSSYVASLYAKGLNKILEKVGEEAIETILAARDAEVSGEHQALISETADLWFHSLVMLAKL GEHPDKVLAELQRRFGLSGHDEKAARSGKH
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=92, Percent_Identity=41.304347826087, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_ALCBS (Q0VMA1)
Other databases:
- EMBL: AM286690 - RefSeq: YP_693969.1 - ProteinModelPortal: Q0VMA1 - SMR: Q0VMA1 - STRING: Q0VMA1 - GeneID: 4212201 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2249 - NMPDR: fig|393595.12.peg.2250 - eggNOG: COG0140 - HOGENOM: HBG646527 - OMA: ETVMAAK - ProtClustDB: PRK00400 - BioCyc: ABOR393595:ABO_2249-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 12162; Mature: 12031
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILSELHQVLESRKGANPDSSYVASLYAKGLNKILEKVGEEAIETILAARDAEVSGEH CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QALISETADLWFHSLVMLAKLGEHPDKVLAELQRRFGLSGHDEKAARSGKH HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure SDILSELHQVLESRKGANPDSSYVASLYAKGLNKILEKVGEEAIETILAARDAEVSGEH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QALISETADLWFHSLVMLAKLGEHPDKVLAELQRRFGLSGHDEKAARSGKH HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA