| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834972
Identifier: 110834972
GI number: 110834972
Start: 2417040
End: 2417942
Strand: Direct
Name: 110834972
Synonym: ABO_2111
Alternate gene names: NA
Gene position: 2417040-2417942 (Clockwise)
Preceding gene: 110834970
Following gene: 110834973
Centisome position: 77.47
GC content: 58.47
Gene sequence:
>903_bases ATGGCTGCGTGTGGCTTTTACTCTGAAAAACCACCCAAGGGCAGCAGTATACCTAAGCTCCTCACCAATACGCTGCGCGA GTGGGCGCCTACTGGCCCGCCTCGGGGTGTCATCTTAGGCTTACATAGTTTTGGTGATTTCGGCGCGGCCTTTGAACAGG TTGGCCCCTGGTTCGCGGACGCCGGCTATCTGTTTGTGGCCTATGACCAGGCAGGGTTCGGCGACCGACAAAAACAAAGC CGCTGGGCAGGTGAGCACCAACTGGTTGACGACGCAGCAACACAAATTCGTCGACTGCACCAGGCATACCCGCAGCCCCT GTTTGTGTTCGGTGAAAGCTTAGGCGGTGCTGTAGCTATATTGGCCGCCCAACAACAACGGGACAAACTCGCTGGGCTGG TGCTGGCCGCGCCTGCAGTGCGCGAAGGCATTCCCTTCCGCTACGGCTGGAATGCAGCTATCGCAACCGCTGCCACTCTA GCCCCTGGCTACCTACTGACCGTGGAGCGCCGAGCTGACGACCCTAGCCTGTCGCCCCTCAGTGCGCAACGGCTGGCCAA GAACCCCCGCGTTATGCGTGAGGTACGCATGGACGCCTACTGGGGCCTGATCAAGCTAGCCGACAGCGCCAGCGATTCCG CTAACCACCTCAACATCCCCACCCTATTGCTGTACGGAGGCAATGACCATTCCGTCCCCGAGGCCGGCATTACGAATCTG CGCCAGCATTTATCTGCTAACAACCAAGGGAAATACCGTTTCTACCCGCAAGCGCCACACCTGTTACTTCAGAGCCAGGA ATGGCAGCGAATTTGCAGGGACATTGCACAATGGCTTACCCGAAGCCAAACACCACAGAAAAACACAAAAAATGGCCTGA CCGGCTCCACCCCCGCCCTGTGA
Upstream 100 bases:
>100_bases TCACTCGCCGTTGCAACGACACTGCTATGGTCATGGCATGACTCTCCGCTCTGCTCATCCTGTTATTCGCTTTTCTCTTA TTCTTTTTATTGGGGCACTG
Downstream 100 bases:
>100_bases GGCCTGTTAAGCTGGCAACACACCAACAGGAAAAAGGGCATCCATAGCCATGAGCAAACGCGTACTCATCACCGGCGGTA ATTCCGGCATTGGTTTCTGC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Lysophospholipase; Acylglycerol Lipase; Esterase/Lipase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Alpha/Beta Hydrolase Superfamily Lysophospholipase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAACGFYSEKPPKGSSIPKLLTNTLREWAPTGPPRGVILGLHSFGDFGAAFEQVGPWFADAGYLFVAYDQAGFGDRQKQS RWAGEHQLVDDAATQIRRLHQAYPQPLFVFGESLGGAVAILAAQQQRDKLAGLVLAAPAVREGIPFRYGWNAAIATAATL APGYLLTVERRADDPSLSPLSAQRLAKNPRVMREVRMDAYWGLIKLADSASDSANHLNIPTLLLYGGNDHSVPEAGITNL RQHLSANNQGKYRFYPQAPHLLLQSQEWQRICRDIAQWLTRSQTPQKNTKNGLTGSTPAL
Sequences:
>Translated_300_residues MAACGFYSEKPPKGSSIPKLLTNTLREWAPTGPPRGVILGLHSFGDFGAAFEQVGPWFADAGYLFVAYDQAGFGDRQKQS RWAGEHQLVDDAATQIRRLHQAYPQPLFVFGESLGGAVAILAAQQQRDKLAGLVLAAPAVREGIPFRYGWNAAIATAATL APGYLLTVERRADDPSLSPLSAQRLAKNPRVMREVRMDAYWGLIKLADSASDSANHLNIPTLLLYGGNDHSVPEAGITNL RQHLSANNQGKYRFYPQAPHLLLQSQEWQRICRDIAQWLTRSQTPQKNTKNGLTGSTPAL >Mature_299_residues AACGFYSEKPPKGSSIPKLLTNTLREWAPTGPPRGVILGLHSFGDFGAAFEQVGPWFADAGYLFVAYDQAGFGDRQKQSR WAGEHQLVDDAATQIRRLHQAYPQPLFVFGESLGGAVAILAAQQQRDKLAGLVLAAPAVREGIPFRYGWNAAIATAATLA PGYLLTVERRADDPSLSPLSAQRLAKNPRVMREVRMDAYWGLIKLADSASDSANHLNIPTLLLYGGNDHSVPEAGITNLR QHLSANNQGKYRFYPQAPHLLLQSQEWQRICRDIAQWLTRSQTPQKNTKNGLTGSTPAL
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51242953, Length=273, Percent_Identity=24.9084249084249, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI6005786, Length=272, Percent_Identity=24.2647058823529, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32859; Mature: 32727
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACGFYSEKPPKGSSIPKLLTNTLREWAPTGPPRGVILGLHSFGDFGAAFEQVGPWFAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEC AGYLFVAYDQAGFGDRQKQSRWAGEHQLVDDAATQIRRLHQAYPQPLFVFGESLGGAVAI CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE LAAQQQRDKLAGLVLAAPAVREGIPFRYGWNAAIATAATLAPGYLLTVERRADDPSLSPL HHHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCCH SAQRLAKNPRVMREVRMDAYWGLIKLADSASDSANHLNIPTLLLYGGNDHSVPEAGITNL HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHH RQHLSANNQGKYRFYPQAPHLLLQSQEWQRICRDIAQWLTRSQTPQKNTKNGLTGSTPAL HHHHCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AACGFYSEKPPKGSSIPKLLTNTLREWAPTGPPRGVILGLHSFGDFGAAFEQVGPWFAD CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEC AGYLFVAYDQAGFGDRQKQSRWAGEHQLVDDAATQIRRLHQAYPQPLFVFGESLGGAVAI CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE LAAQQQRDKLAGLVLAAPAVREGIPFRYGWNAAIATAATLAPGYLLTVERRADDPSLSPL HHHHHHHHHHHHHHHCCHHHHHCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCCH SAQRLAKNPRVMREVRMDAYWGLIKLADSASDSANHLNIPTLLLYGGNDHSVPEAGITNL HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHH RQHLSANNQGKYRFYPQAPHLLLQSQEWQRICRDIAQWLTRSQTPQKNTKNGLTGSTPAL HHHHCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA