The gene/protein map for NC_008260 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is gdhA [H]

Identifier: 110834960

GI number: 110834960

Start: 2405463

End: 2405657

Strand: Direct

Name: gdhA [H]

Synonym: ABO_2099

Alternate gene names: 110834960

Gene position: 2405463-2405657 (Clockwise)

Preceding gene: 110834958

Following gene: 110834961

Centisome position: 77.09

GC content: 51.28

Gene sequence:

>195_bases
ATGACATCAGGGTTAGAGAGTTTTCTTCAGCAGATAAAACGGCGCGACCCGGAACAAGCCGCCTTCCACCAAGCCAGCGA
AGAGGTTCTGCGCTCACTATGGCCATTCCTCAAACTGCAGCCAAAGTATCAATCCATGGGCCTACTGGAAAGGCTTGTTG
AACCCGAGCGGGTGATTCAATTTAGAATCGCCTAG

Upstream 100 bases:

>100_bases
GCCTAGCCCGAGACAAACAGTACCCCCTAAGCGCATCAAATTGGTGCGCCATAGCGCACCAATTAAAACCACTCACCACT
CAGACGCTCAGGATTCCAAT

Downstream 100 bases:

>100_bases
CAAGATGATAACGGTCAGGTCCAGTCAATCGTGGATATCGGGTACAGATGAACAGCGCCATCGGCCCCTACAAAGGCGGG
CGACGCTTTCATCCATCGGT

Product: glutamate dehydrogenase, fragment

Products: NA

Alternate protein names: NADP-GDH [H]

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MTSGLESFLQQIKRRDPEQAAFHQASEEVLRSLWPFLKLQPKYQSMGLLERLVEPERVIQFRIA

Sequences:

>Translated_64_residues
MTSGLESFLQQIKRRDPEQAAFHQASEEVLRSLWPFLKLQPKYQSMGLLERLVEPERVIQFRIA
>Mature_63_residues
TSGLESFLQQIKRRDPEQAAFHQASEEVLRSLWPFLKLQPKYQSMGLLERLVEPERVIQFRIA

Specific function: Unknown

COG id: COG0334

COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]

Homologues:

Organism=Escherichia coli, GI1788059, Length=62, Percent_Identity=62.9032258064516, Blast_Score=89, Evalue=4e-20,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006095
- InterPro:   IPR006096
- InterPro:   IPR006097
- InterPro:   IPR014362
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]

EC number: =1.4.1.4 [H]

Molecular weight: Translated: 7572; Mature: 7441

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGLESFLQQIKRRDPEQAAFHQASEEVLRSLWPFLKLQPKYQSMGLLERLVEPERVIQ
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH
FRIA
HCCC
>Mature Secondary Structure 
TSGLESFLQQIKRRDPEQAAFHQASEEVLRSLWPFLKLQPKYQSMGLLERLVEPERVIQ
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH
FRIA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6308576; 6373501; 9097039; 9278503; 9298646 [H]