| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834934
Identifier: 110834934
GI number: 110834934
Start: 2358482
End: 2358748
Strand: Direct
Name: 110834934
Synonym: ABO_2073
Alternate gene names: NA
Gene position: 2358482-2358748 (Clockwise)
Preceding gene: 110834933
Following gene: 110834935
Centisome position: 75.59
GC content: 60.3
Gene sequence:
>267_bases ATGATGACGAAACCCGAATTCGCTCTATGGCTGAGACGATTCCGCACCGGCTGCTGGATGGTCTTCGGTGTGGCAACGCT CGTATTCGCCGTGACCAGTTTTATGGAAATGACGGTGGCCAACTCGCCCCAGGAACCATCGACACCACCAGGTCCACCCG AATCCTACCGCTGGTTCATGGTGATGCTGCTGGCCTGCATCTGCGCCACCTTTGCCAGGCTGGGGCTGACCTGGCTAACC CGGCCCGACGACGTCGAGGACCGCTAG
Upstream 100 bases:
>100_bases TTATACCCGGGCCAGGCATGTTGCGACACCTGAACCCCAGCACACCCTCCCCGCGACCGGGTGGCCCAGGCGGCAGCGGG TATCTCAAAAAGTGGAACAA
Downstream 100 bases:
>100_bases TTCAGTGGTTTTTATGGACGCTCCCGATCGATGCCGATGGGACATCGGCACCGATCGGGAGCCACACACAAAGACATGGC TAACCTTGAGGACATCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MMTKPEFALWLRRFRTGCWMVFGVATLVFAVTSFMEMTVANSPQEPSTPPGPPESYRWFMVMLLACICATFARLGLTWLT RPDDVEDR
Sequences:
>Translated_88_residues MMTKPEFALWLRRFRTGCWMVFGVATLVFAVTSFMEMTVANSPQEPSTPPGPPESYRWFMVMLLACICATFARLGLTWLT RPDDVEDR >Mature_88_residues MMTKPEFALWLRRFRTGCWMVFGVATLVFAVTSFMEMTVANSPQEPSTPPGPPESYRWFMVMLLACICATFARLGLTWLT RPDDVEDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10112; Mature: 10112
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 11.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTKPEFALWLRRFRTGCWMVFGVATLVFAVTSFMEMTVANSPQEPSTPPGPPESYRWFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH VMLLACICATFARLGLTWLTRPDDVEDR HHHHHHHHHHHHHHCCHHCCCCCCCCCC >Mature Secondary Structure MMTKPEFALWLRRFRTGCWMVFGVATLVFAVTSFMEMTVANSPQEPSTPPGPPESYRWFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH VMLLACICATFARLGLTWLTRPDDVEDR HHHHHHHHHHHHHHCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA