| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834932
Identifier: 110834932
GI number: 110834932
Start: 2357208
End: 2357540
Strand: Direct
Name: 110834932
Synonym: ABO_2071
Alternate gene names: NA
Gene position: 2357208-2357540 (Clockwise)
Preceding gene: 110834931
Following gene: 110834933
Centisome position: 75.55
GC content: 61.56
Gene sequence:
>333_bases ATGAACCGTTTTGCCCTGATGATGGTCTTCCCCGCCCTGCTGCTGATCGGTTGCGATAACGGCCCGGAAGGCCGGAGCCT GGAGTATTTCAAGGCGCACCCGAAAGAAACCCTGACCGTCGCCTTTACCTGCGAGCTGGACCATCCCGACTGGCAACGTG AGGCCATGACCACGCCGCCTCAGGATTACAGCGCCACCACCCGCGAGTGCGTCAATGCCTGGGACAACCTAGATGCCGCC CGTGCGGAGCTGGGCCTGGGCTATGAAGAGGCCAAGAAACTCGGCCTGGGCGACCGCTATCAACCCAAAGTCCGGCACCG GCTGTTTGAGTAA
Upstream 100 bases:
>100_bases CAACATCACCCTTCAGCAGCGTCAATACGAGTACGAGCAAGCCCTGGCCGTACAGCAGGAAAAAGACGCGCCCCGCTACC GCTTGTTTGAGGAGTAAGCC
Downstream 100 bases:
>100_bases GGGAGAGAGGTCATGTCCACCATCGCCAGCATGCACGCCCTTCTGGTCACTGACATTGTCACCGCCGTTTCCGGTCTGGC CCAGCAGACCATGGGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MNRFALMMVFPALLLIGCDNGPEGRSLEYFKAHPKETLTVAFTCELDHPDWQREAMTTPPQDYSATTRECVNAWDNLDAA RAELGLGYEEAKKLGLGDRYQPKVRHRLFE
Sequences:
>Translated_110_residues MNRFALMMVFPALLLIGCDNGPEGRSLEYFKAHPKETLTVAFTCELDHPDWQREAMTTPPQDYSATTRECVNAWDNLDAA RAELGLGYEEAKKLGLGDRYQPKVRHRLFE >Mature_110_residues MNRFALMMVFPALLLIGCDNGPEGRSLEYFKAHPKETLTVAFTCELDHPDWQREAMTTPPQDYSATTRECVNAWDNLDAA RAELGLGYEEAKKLGLGDRYQPKVRHRLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12576; Mature: 12576
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFALMMVFPALLLIGCDNGPEGRSLEYFKAHPKETLTVAFTCELDHPDWQREAMTTPP CCHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC QDYSATTRECVNAWDNLDAARAELGLGYEEAKKLGLGDRYQPKVRHRLFE CCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MNRFALMMVFPALLLIGCDNGPEGRSLEYFKAHPKETLTVAFTCELDHPDWQREAMTTPP CCHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCC QDYSATTRECVNAWDNLDAARAELGLGYEEAKKLGLGDRYQPKVRHRLFE CCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA