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The map label for this gene is dnaG [H]

Identifier: 110834923

GI number: 110834923

Start: 2348052

End: 2350010

Strand: Direct

Name: dnaG [H]

Synonym: ABO_2062

Alternate gene names: 110834923

Gene position: 2348052-2350010 (Clockwise)

Preceding gene: 110834922

Following gene: 110834924

Centisome position: 75.25

GC content: 58.7

Gene sequence:

>1959_bases
ATGGCACGCATTCCGGAAAATTTTGTTCAGGACCTTCTGGCTCGTACCGATCTGGTGGAGCTGATAGACGCTCGCGTGCC
CCTAAAAAAAACTGGCCGCAACTACAGCGCCTGCTGCCCATTCCACCAGGAAAAAACGCCCTCCTTCACTGTCGCGCCAG
ATAAGCAATTTTATTACTGTTTCGGCTGCGGTGCTTCCGGCAACGCCGCGGGCTTCCTAATGGAATATGAGCACCTGAAC
TTTCCGGAAGCGGTGAAGCAACTCGCCGATCGCGCCGGCATGGAGGTGCCTGAATCGCGACCAGAAACCACCGCCGATCG
CCAGAAAAAAGATCGCCTGCAATCCCTTTACGACCTGCTTAGCCGCGCCGAAAAGTTCTACGTGCAACAGTTACGCCAAG
CGCCTGAGCGTCAAAAAGCAGTGAATTACCTTAAAAACCGAGGGTTAAGCGGCGAAATTGCAAAACAGTTCGCCATTGGG
TTTGCGCCACCCGGCTACGACAATCTAATCAACGGCCTTTCTCTCACTGAAACCAGCCTGGAACAAGCCGTTACCGGTGG
CCTGCTGGTGCGCCGGGAAGACAATAACCGCACCTACGATAAATTCCGGGATCGCATCATTTTTCCCATTCGCGATAGCC
GCGGCCGCACCATCGGCTTTGGCGGTCGGGTGCTGGGCGACGGCAAGCCGAAATACCTTAACAGCCCAGAAACCCCCGTT
TTCCACAAGGGCCAGGAGCTTTACGGGCTATGGGAGTGGCGCCAGAGCAGGGACCGCAGCGACCGCCTCTATGTAGTCGA
AGGTTACATGGACGTGATCGCCCTAACGCAGCACGGCGTACCCAATGTGGTCGCCACCTTGGGCACCGCCACCACCGAAG
ATCACGCCCGCAAACTGTTCCGCCAGGTCAATGAAGTGATCCTGTGCTTTGACGGGGATAAGGCCGGCGTGCGTGCCGCT
TGGCGTGCGCTGGAATCGCTTCTACCGGCGCTGGATGACGGCAAACAGGTACGTTTCTTATTCCTCCCAGACGGGGAAGA
CCCGGACACACTCGTGCGCCAACAAGGGCCAGAGGCGTTGCGAGCACTCACTGATAAAGCCGACGCCCTGTCCACCTACC
TGTTCCGACATCTATCAGAAGGGCTGGATTTGGAGACCGTGGATGGCCGCGTCCGGCTTGCCCGCCTCGCCCTGCCCTAC
CTGGACAAGCCCGCCGGTCCGGTTTACCGCGCCCTGCTCACTGAAGAGCTCAGCCGCCTCACCCGACTGGACAAGGAATC
ACTGATCCAGCTCAAACCAGCACCGGCAGCACCCCGGCCTACGCCGAGCACCTCGTCACCGGCTGGCAACGCCTACGATT
ATGGGCATGGTTACGAGGATTTCGGTTCCCCGCCGCCGCCCACCGAAGACGACCCCGGCATACCCTACCCGGAAGATTTC
GCCTTCGCGGACGGCGGCAACAACGGCAGCAGCAATAATTTTACCGCAGACAATCGCAACCGAATTCGCCCCAATCCACG
CCAAAATGGCGGTCGCAAAGGCCCACTAACCTTGGCCGAGCGCCTGGTACTTGTACTGCTGGATTACCCATCACTAGTAG
AGCAGCATCCGTTGCCGGACAACATCGAGCAACTGCCGTTACCGCATATCGACCTACTGACTCAGGTCGCTGGGCTGTGC
CGACAAAATCATAGCGCTGCCGCCTTGCTCGGCGCCTTGATGGCCCTTGAGCAGGGCGAAACATTATCTCGCCTGCTCAA
AGCTAGCCTCAAACCGCCAATGGAAGAAGAAATGGCCACTCGGCTATGGCTCGATGCCCTATCACAGCTGGAAGTGACCC
GCCTGGAAGCCGCATTAACAGAGGTAGAACAGGCCGGCATGCCCGACCCGGCGCACTGGCAGGCGCTACATAAAGCCTTG
GCCGAAGCCCGCCAACACGCCCGCAAACCCTTCGACTAA

Upstream 100 bases:

>100_bases
AGACACACACCTGACACCTTACCAGCCAGCGCCCGCATTAAACTTTCCCCACATCGGCAATTCTGCTTGAATAGCAGCCC
ACGCAGAGAGTCCGCGCACC

Downstream 100 bases:

>100_bases
CCCGGCCAATGGTGCAGCCCCAGGGTTGCATTGACTGGCCGTAGACCCCATATCCCAGTATAATACGCCGTTTTCCCACG
CCACCATCACGCTGGCAAGC

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYCFGCGASGNAAGFLMEYEHLN
FPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLLSRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIG
FAPPGYDNLINGLSLTETSLEQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPV
FHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLFRQVNEVILCFDGDKAGVRAA
WRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEALRALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPY
LDKPAGPVYRALLTEELSRLTRLDKESLIQLKPAPAAPRPTPSTSSPAGNAYDYGHGYEDFGSPPPPTEDDPGIPYPEDF
AFADGGNNGSSNNFTADNRNRIRPNPRQNGGRKGPLTLAERLVLVLLDYPSLVEQHPLPDNIEQLPLPHIDLLTQVAGLC
RQNHSAAALLGALMALEQGETLSRLLKASLKPPMEEEMATRLWLDALSQLEVTRLEAALTEVEQAGMPDPAHWQALHKAL
AEARQHARKPFD

Sequences:

>Translated_652_residues
MARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYCFGCGASGNAAGFLMEYEHLN
FPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLLSRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIG
FAPPGYDNLINGLSLTETSLEQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPV
FHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLFRQVNEVILCFDGDKAGVRAA
WRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEALRALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPY
LDKPAGPVYRALLTEELSRLTRLDKESLIQLKPAPAAPRPTPSTSSPAGNAYDYGHGYEDFGSPPPPTEDDPGIPYPEDF
AFADGGNNGSSNNFTADNRNRIRPNPRQNGGRKGPLTLAERLVLVLLDYPSLVEQHPLPDNIEQLPLPHIDLLTQVAGLC
RQNHSAAALLGALMALEQGETLSRLLKASLKPPMEEEMATRLWLDALSQLEVTRLEAALTEVEQAGMPDPAHWQALHKAL
AEARQHARKPFD
>Mature_651_residues
ARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYCFGCGASGNAAGFLMEYEHLNF
PEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLLSRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGF
APPGYDNLINGLSLTETSLEQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPVF
HKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLFRQVNEVILCFDGDKAGVRAAW
RALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEALRALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYL
DKPAGPVYRALLTEELSRLTRLDKESLIQLKPAPAAPRPTPSTSSPAGNAYDYGHGYEDFGSPPPPTEDDPGIPYPEDFA
FADGGNNGSSNNFTADNRNRIRPNPRQNGGRKGPLTLAERLVLVLLDYPSLVEQHPLPDNIEQLPLPHIDLLTQVAGLCR
QNHSAAALLGALMALEQGETLSRLLKASLKPPMEEEMATRLWLDALSQLEVTRLEAALTEVEQAGMPDPAHWQALHKALA
EARQHARKPFD

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1789447, Length=445, Percent_Identity=53.4831460674157, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016136
- InterPro:   IPR013264
- InterPro:   IPR019475
- InterPro:   IPR006295
- InterPro:   IPR013173
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF10410 DnaB_bind; PF08278 DnaG_DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: 2.7.7.-

Molecular weight: Translated: 72667; Mature: 72536

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYC
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
FGCGASGNAAGFLMEYEHLNFPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLL
EECCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGFAPPGYDNLINGLSLTETSL
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
EQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPV
HHHHHCCEEEEECCCCCHHHHHHCCEEEEEECCCCCEEECCCEEECCCCCCCCCCCCCCC
FHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLF
EECCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
RQVNEVILCFDGDKAGVRAAWRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEAL
HHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHH
RALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYLDKPAGPVYRALLTEELSRL
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TRLDKESLIQLKPAPAAPRPTPSTSSPAGNAYDYGHGYEDFGSPPPPTEDDPGIPYPEDF
HHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
AFADGGNNGSSNNFTADNRNRIRPNPRQNGGRKGPLTLAERLVLVLLDYPSLVEQHPLPD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCC
NIEQLPLPHIDLLTQVAGLCRQNHSAAALLGALMALEQGETLSRLLKASLKPPMEEEMAT
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
RLWLDALSQLEVTRLEAALTEVEQAGMPDPAHWQALHKALAEARQHARKPFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYC
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
FGCGASGNAAGFLMEYEHLNFPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLL
EECCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGFAPPGYDNLINGLSLTETSL
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
EQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPV
HHHHHCCEEEEECCCCCHHHHHHCCEEEEEECCCCCEEECCCEEECCCCCCCCCCCCCCC
FHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLF
EECCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
RQVNEVILCFDGDKAGVRAAWRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEAL
HHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHH
RALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYLDKPAGPVYRALLTEELSRL
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TRLDKESLIQLKPAPAAPRPTPSTSSPAGNAYDYGHGYEDFGSPPPPTEDDPGIPYPEDF
HHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
AFADGGNNGSSNNFTADNRNRIRPNPRQNGGRKGPLTLAERLVLVLLDYPSLVEQHPLPD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCC
NIEQLPLPHIDLLTQVAGLCRQNHSAAALLGALMALEQGETLSRLLKASLKPPMEEEMAT
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
RLWLDALSQLEVTRLEAALTEVEQAGMPDPAHWQALHKALAEARQHARKPFD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]