| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834916
Identifier: 110834916
GI number: 110834916
Start: 2343238
End: 2344170
Strand: Direct
Name: 110834916
Synonym: ABO_2055
Alternate gene names: NA
Gene position: 2343238-2344170 (Clockwise)
Preceding gene: 110834915
Following gene: 110834919
Centisome position: 75.1
GC content: 52.73
Gene sequence:
>933_bases ATGGATCGACGAACATTGCGACTTCTAACGCTTTTTCTCGTTCTTTTCAGTACCGGCGCCCAAGCGGATATTTTTCAATG GCAGGATGCCAGCGGCAAGCTGCATTTCGGTGATCGGCCACCAGAGGGCGCCCAAACCAAAACCATCACTCCGAATATCA GCCCGCAACTCAAAGACCTGGAAATCCACGTTAAGCGCCAGGATTTCACCCTGACCGGCGACTTGCAGCAACACACCTTA GATAACATTCGCCACATCTACCAACGCTACCGCCGGGACTTCGGGCTAGACCTACATGGCACCGCAGAAGTGAACGTGTT TCTGATTGAAAAACAGGACGATTTTCAACAATGGATGGTTGAGCGGATTGGCTCCAGCAGCCGTCATTATGCCGGCGTGT TCATTCCTGCAACCAACGAAGTTGCCGTGTGGAAATGGGCCGAAAATGAACAACAAGTAGCCCAAACCATTCTTCATGAA TCCAGCCATGTGTTGCTCTACCAATTATCGCCATCAGCCCCGGTGTGGCTACAGGAAGGGCTAGCGCAATACTTCCAAAC CCTGGAAACACAACCGGACGGGCGCCAGAGAATCAGCGCCCTGCCCGATGCCCAAAAACGCATTCAGACCTGGGTTGAAC AACAGCGCCTGATTACCCTGCGGCAGTATTTGTCCCTGGATGATGCTCAATGGCGCAAGATGGCTCACCAGCTCAACGCC ATTCCCTACACCGTTGCTTGGGCAACCACCGCCTTTCTCATGTCCAAACCCGTGGGCCGTTCTATTTTGCGGCAATTGCT TCAGGATCTGGAAAAAAACCATCAGAGGCCAACGCTTCAACGTATCGACCACCTCTATCCCGGTGGCCTCTCTCGGCTGG AATACGATTTCTTCCGTTGGGCGCAAAGCGATATGACACCGCATTGGTATTGA
Upstream 100 bases:
>100_bases TTGAGCAAATGAGAGGGCCTTTCGTCTATGTGAATGAAGACGGAACCCACCGCAACGCCAACGCCGAAGAGGTCGCCGCA GACCAAAAGAAAACCCAGAA
Downstream 100 bases:
>100_bases GAGACACAGCACGGAACACGTTGCATCTCAGGCCTACCGATAGCTGCCGGTTTGCACCGACATGTCGCTAACGCAATCTA CAAAAACTATTGTTTCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MDRRTLRLLTLFLVLFSTGAQADIFQWQDASGKLHFGDRPPEGAQTKTITPNISPQLKDLEIHVKRQDFTLTGDLQQHTL DNIRHIYQRYRRDFGLDLHGTAEVNVFLIEKQDDFQQWMVERIGSSSRHYAGVFIPATNEVAVWKWAENEQQVAQTILHE SSHVLLYQLSPSAPVWLQEGLAQYFQTLETQPDGRQRISALPDAQKRIQTWVEQQRLITLRQYLSLDDAQWRKMAHQLNA IPYTVAWATTAFLMSKPVGRSILRQLLQDLEKNHQRPTLQRIDHLYPGGLSRLEYDFFRWAQSDMTPHWY
Sequences:
>Translated_310_residues MDRRTLRLLTLFLVLFSTGAQADIFQWQDASGKLHFGDRPPEGAQTKTITPNISPQLKDLEIHVKRQDFTLTGDLQQHTL DNIRHIYQRYRRDFGLDLHGTAEVNVFLIEKQDDFQQWMVERIGSSSRHYAGVFIPATNEVAVWKWAENEQQVAQTILHE SSHVLLYQLSPSAPVWLQEGLAQYFQTLETQPDGRQRISALPDAQKRIQTWVEQQRLITLRQYLSLDDAQWRKMAHQLNA IPYTVAWATTAFLMSKPVGRSILRQLLQDLEKNHQRPTLQRIDHLYPGGLSRLEYDFFRWAQSDMTPHWY >Mature_310_residues MDRRTLRLLTLFLVLFSTGAQADIFQWQDASGKLHFGDRPPEGAQTKTITPNISPQLKDLEIHVKRQDFTLTGDLQQHTL DNIRHIYQRYRRDFGLDLHGTAEVNVFLIEKQDDFQQWMVERIGSSSRHYAGVFIPATNEVAVWKWAENEQQVAQTILHE SSHVLLYQLSPSAPVWLQEGLAQYFQTLETQPDGRQRISALPDAQKRIQTWVEQQRLITLRQYLSLDDAQWRKMAHQLNA IPYTVAWATTAFLMSKPVGRSILRQLLQDLEKNHQRPTLQRIDHLYPGGLSRLEYDFFRWAQSDMTPHWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36291; Mature: 36291
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRTLRLLTLFLVLFSTGAQADIFQWQDASGKLHFGDRPPEGAQTKTITPNISPQLKDL CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCEECCCCCCCCCCE EIHVKRQDFTLTGDLQQHTLDNIRHIYQRYRRDFGLDLHGTAEVNVFLIEKQDDFQQWMV EEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH ERIGSSSRHYAGVFIPATNEVAVWKWAENEQQVAQTILHESSHVLLYQLSPSAPVWLQEG HHHCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH LAQYFQTLETQPDGRQRISALPDAQKRIQTWVEQQRLITLRQYLSLDDAQWRKMAHQLNA HHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC IPYTVAWATTAFLMSKPVGRSILRQLLQDLEKNHQRPTLQRIDHLYPGGLSRLEYDFFRW CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH AQSDMTPHWY HHHCCCCCCC >Mature Secondary Structure MDRRTLRLLTLFLVLFSTGAQADIFQWQDASGKLHFGDRPPEGAQTKTITPNISPQLKDL CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCEECCCCCCCCCCE EIHVKRQDFTLTGDLQQHTLDNIRHIYQRYRRDFGLDLHGTAEVNVFLIEKQDDFQQWMV EEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH ERIGSSSRHYAGVFIPATNEVAVWKWAENEQQVAQTILHESSHVLLYQLSPSAPVWLQEG HHHCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH LAQYFQTLETQPDGRQRISALPDAQKRIQTWVEQQRLITLRQYLSLDDAQWRKMAHQLNA HHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC IPYTVAWATTAFLMSKPVGRSILRQLLQDLEKNHQRPTLQRIDHLYPGGLSRLEYDFFRW CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH AQSDMTPHWY HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA