| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834915
Identifier: 110834915
GI number: 110834915
Start: 2342828
End: 2343265
Strand: Direct
Name: 110834915
Synonym: ABO_2054
Alternate gene names: NA
Gene position: 2342828-2343265 (Clockwise)
Preceding gene: 110834914
Following gene: 110834916
Centisome position: 75.09
GC content: 52.51
Gene sequence:
>438_bases ATGAACATGATAAGAATAATACTGCTGTCACTGGCGACGGCCTCTGCCAGCGCAGAAATCTATCGTTGGAAGGACGCCAA TGGCAACTGGCAATTTGGCGACAGGGCGCCACAGGCAGAACATGAAACTCTGGACATAAAACCGCCCCCTAAGATTGGCC AAGATGACGCTCTAGATATCCATGCCCGTACCCAGCGGCTACTCCAAAGCCAGCAAACCCAAGCCCGCCATAAAGCACTG GCAGAAAAAAACGCACGCGATGAATACCGGGAACGGTTTGCGCAACCCTGCAAACAGGCAGAAAAGCGGCTTGAGCAAAT GAGAGGGCCTTTCGTCTATGTGAATGAAGACGGAACCCACCGCAACGCCAACGCCGAAGAGGTCGCCGCAGACCAAAAGA AAACCCAGAAATGGATCGACGAACATTGCGACTTCTAA
Upstream 100 bases:
>100_bases CCCTTTATTACCGGACAAATATTGGCCGTGGACGGGGGGCGGTCACTGGCCTTACAAGGAAGCTAAAAACAAAACATGAG AAGGGCTCTCGGGGGCATCC
Downstream 100 bases:
>100_bases CGCTTTTTCTCGTTCTTTTCAGTACCGGCGCCCAAGCGGATATTTTTCAATGGCAGGATGCCAGCGGCAAGCTGCATTTC GGTGATCGGCCACCAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNMIRIILLSLATASASAEIYRWKDANGNWQFGDRAPQAEHETLDIKPPPKIGQDDALDIHARTQRLLQSQQTQARHKAL AEKNARDEYRERFAQPCKQAEKRLEQMRGPFVYVNEDGTHRNANAEEVAADQKKTQKWIDEHCDF
Sequences:
>Translated_145_residues MNMIRIILLSLATASASAEIYRWKDANGNWQFGDRAPQAEHETLDIKPPPKIGQDDALDIHARTQRLLQSQQTQARHKAL AEKNARDEYRERFAQPCKQAEKRLEQMRGPFVYVNEDGTHRNANAEEVAADQKKTQKWIDEHCDF >Mature_145_residues MNMIRIILLSLATASASAEIYRWKDANGNWQFGDRAPQAEHETLDIKPPPKIGQDDALDIHARTQRLLQSQQTQARHKAL AEKNARDEYRERFAQPCKQAEKRLEQMRGPFVYVNEDGTHRNANAEEVAADQKKTQKWIDEHCDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16771; Mature: 16771
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIRIILLSLATASASAEIYRWKDANGNWQFGDRAPQAEHETLDIKPPPKIGQDDALDI CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHH HARTQRLLQSQQTQARHKALAEKNARDEYRERFAQPCKQAEKRLEQMRGPFVYVNEDGTH HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC RNANAEEVAADQKKTQKWIDEHCDF CCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMIRIILLSLATASASAEIYRWKDANGNWQFGDRAPQAEHETLDIKPPPKIGQDDALDI CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHH HARTQRLLQSQQTQARHKALAEKNARDEYRERFAQPCKQAEKRLEQMRGPFVYVNEDGTH HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC RNANAEEVAADQKKTQKWIDEHCDF CCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA