BacMap

Definition	Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession	NC_008260
Length	3,120,143

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The map label for this gene is fabG1 [H]

Identifier: 110834914

GI number: 110834914

Start: 2342056

End: 2342793

Strand: Direct

Name: fabG1 [H]

Synonym: ABO_2053

Alternate gene names: 110834914

Gene position: 2342056-2342793 (Clockwise)

Preceding gene: 110834913

Following gene: 110834915

Centisome position: 75.06

GC content: 58.81

Gene sequence:

>738_bases
ATGAACGCCCCCGTCGCCCTGGTTACCGGCAGCGCCCGCCGTATTGGCGCCCAGATTGTTCGCACCCTGCATCAGCACGG
GATGCGGGTGATCATTCATTACCGGGGTAGCCAGGAAGAAGCCGAGAGCCTGGCCGCCGAGCTGAATCAGCTACGCCCCG
GTAGTGCAGGGTTACTGCAAGCCGATTTGGACCAACCCGCCGCCGTGCGCCAACTGGCCAGCGACGCCCTTGCCTGTTTT
GGCCAGCTGGATTTACTTGTCAACAATGCGTCCAGCTTTTACCCCACCCCCATAGAACAGGCAAACGACAGCGACTGGGA
AAAGCTGATTCACAGCAACCTGCGCGCCCCCTTTATTCTCAGCCAGCAGCTGGCGCCTGCATTACGTGAGCAACAGGGCT
GCATTATCAATATTGTCGATGTTTACGCAGAAAAACCGCTGCAAACGCATACCCTGTATTGCATGGCCAAAGCCGGCCTT
GCGATGATGACCAAAAGCTTGGCTCGGGAACTGGGACCAGAGATTCGCGTCAACGGCGTATCCCCGGGGCCCATTCTATG
GCCAGAAGCCGGGCAGATGAACCAGCAGGCCATCCAAGACGCCACCGCCCTGAAACGCAGCGGCGAGCCGGATGACATTG
CCAACACGGTTTACTGGTTGGCTACTGCCGCCCCCTTTATTACCGGACAAATATTGGCCGTGGACGGGGGGCGGTCACTG
GCCTTACAAGGAAGCTAA

Upstream 100 bases:

>100_bases
TGCAGGCCCAAGGCCACGAAGGTCCGGCACTGGGGGAAGCGATTGAGCAAGCCCGCATTGATGCCATCGCCACCTTTAAA
CAACAGGAGCTGAACCCCTG

Downstream 100 bases:

>100_bases
AAACAAAACATGAGAAGGGCTCTCGGGGGCATCCATGAACATGATAAGAATAATACTGCTGTCACTGGCGACGGCCTCTG
CCAGCGCAGAAATCTATCGT

Product: dehydrogenase/reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 1 [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNAPVALVTGSARRIGAQIVRTLHQHGMRVIIHYRGSQEEAESLAAELNQLRPGSAGLLQADLDQPAAVRQLASDALACF
GQLDLLVNNASSFYPTPIEQANDSDWEKLIHSNLRAPFILSQQLAPALREQQGCIINIVDVYAEKPLQTHTLYCMAKAGL
AMMTKSLARELGPEIRVNGVSPGPILWPEAGQMNQQAIQDATALKRSGEPDDIANTVYWLATAAPFITGQILAVDGGRSL
ALQGS

Sequences:

>Translated_245_residues
MNAPVALVTGSARRIGAQIVRTLHQHGMRVIIHYRGSQEEAESLAAELNQLRPGSAGLLQADLDQPAAVRQLASDALACF
GQLDLLVNNASSFYPTPIEQANDSDWEKLIHSNLRAPFILSQQLAPALREQQGCIINIVDVYAEKPLQTHTLYCMAKAGL
AMMTKSLARELGPEIRVNGVSPGPILWPEAGQMNQQAIQDATALKRSGEPDDIANTVYWLATAAPFITGQILAVDGGRSL
ALQGS
>Mature_245_residues
MNAPVALVTGSARRIGAQIVRTLHQHGMRVIIHYRGSQEEAESLAAELNQLRPGSAGLLQADLDQPAAVRQLASDALACF
GQLDLLVNNASSFYPTPIEQANDSDWEKLIHSNLRAPFILSQQLAPALREQQGCIINIVDVYAEKPLQTHTLYCMAKAGL
AMMTKSLARELGPEIRVNGVSPGPILWPEAGQMNQQAIQDATALKRSGEPDDIANTVYWLATAAPFITGQILAVDGGRSL
ALQGS

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=33.2, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=31.1203319502075, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=30.2040816326531, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=30.4, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI59889578, Length=233, Percent_Identity=32.618025751073, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI10190704, Length=244, Percent_Identity=30.7377049180328, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=30.5220883534137, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=25.7261410788382, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI33667109, Length=184, Percent_Identity=32.6086956521739, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=25.4980079681275, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=27.5, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=193, Percent_Identity=27.979274611399, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI20149619, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4503301, Length=197, Percent_Identity=26.3959390862944, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=34.5833333333333, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=33.8582677165354, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=33.0508474576271, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.8548387096774, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787891, Length=239, Percent_Identity=28.4518828451883, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790717, Length=259, Percent_Identity=28.1853281853282, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.1255060728745, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787820, Length=229, Percent_Identity=27.0742358078603, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=27.4509803921569, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=28.8065843621399, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=28.1124497991968, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI2367175, Length=256, Percent_Identity=25.78125, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=30.1158301158301, Blast_Score=106, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=30.6513409961686, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=32.0987654320988, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=261, Percent_Identity=27.2030651340996, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=30.4511278195489, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=31.1023622047244, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=25.6, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=29.4339622641509, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=29.6577946768061, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=29.5081967213115, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=244, Percent_Identity=29.0983606557377, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=29.9242424242424, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=28.8973384030418, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=30.6818181818182, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=29.0566037735849, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=29.4339622641509, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=28.6290322580645, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=28.6821705426357, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=28.6821705426357, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=23.8805970149254, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=29.0697674418605, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=26.953125, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=29.4339622641509, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=25.968992248062, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=25.9541984732824, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=29.2490118577075, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=222, Percent_Identity=26.5765765765766, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=28.5140562248996, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=29.3650793650794, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=31.1740890688259, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=29.6296296296296, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=28.9795918367347, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=31.3008130081301, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=31.6, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24644337, Length=195, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=28.0487804878049, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26356; Mature: 26356

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVALVTGSARRIGAQIVRTLHQHGMRVIIHYRGSQEEAESLAAELNQLRPGSAGLLQ
CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEE
ADLDQPAAVRQLASDALACFGQLDLLVNNASSFYPTPIEQANDSDWEKLIHSNLRAPFIL
CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHH
SQQLAPALREQQGCIINIVDVYAEKPLQTHTLYCMAKAGLAMMTKSLARELGPEIRVNGV
HHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
SPGPILWPEAGQMNQQAIQDATALKRSGEPDDIANTVYWLATAAPFITGQILAVDGGRSL
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEE
ALQGS
EEECC
>Mature Secondary Structure
MNAPVALVTGSARRIGAQIVRTLHQHGMRVIIHYRGSQEEAESLAAELNQLRPGSAGLLQ
CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEE
ADLDQPAAVRQLASDALACFGQLDLLVNNASSFYPTPIEQANDSDWEKLIHSNLRAPFIL
CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHH
SQQLAPALREQQGCIINIVDVYAEKPLQTHTLYCMAKAGLAMMTKSLARELGPEIRVNGV
HHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
SPGPILWPEAGQMNQQAIQDATALKRSGEPDDIANTVYWLATAAPFITGQILAVDGGRSL
CCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEE
ALQGS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]