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The map label for this gene is rsbQ [H]

Identifier: 110636402

GI number: 110636402

Start: 4386989

End: 4387792

Strand: Reverse

Name: rsbQ [H]

Synonym: Meso_4078

Alternate gene names: 110636402

Gene position: 4387792-4386989 (Counterclockwise)

Preceding gene: 110636403

Following gene: 110636401

Centisome position: 99.44

GC content: 60.7

Gene sequence:

>804_bases
GTGAGCGTTATTCAGCGAAACAACGTAAAAGTGCTGGGGTCAGGCGAGAAGGCGATGGTCTTCGGCCATGGCTTCGGCTG
CGATCAGAATATGTGGCGCTTTATCTGGCCGGCCTTTGCCGAGGAATACCGCATCGTCCTCTTCGATCACGTAGGCTGCG
GCGGCTCCGACCTCAAGGCTTACGACGCGGGTAAATACAGCTCGCTCGAAGGCTATGCGGAGGACATCATCGAGATCTGC
CGCGCGCTGTACGTCACGCATGGCGTCTTTGTCGGCCATTCCGTGAGCGCCATGATCGGGGCCATGGCCTCCGTCAAGGC
GCCGGACATCTTCGACAACCTCGTTATGATCGGCCCCTCGCCGCGCTATATCGACGACGCCGAGTATATCGGAGGCTTCA
CCGAGGCGCAGATTCACGAGCTTCTGGACTTTCTCGATTCCAACCATATGGGATGGTCGCAGGCCATGGCCCCTGTCATC
ATGGGCAATCCGGACCGGCCGGAATTGGGTGAGGAGCTGACCAACTCCTTCTGCATGACGGACCCCGAGATCGCCAAGCG
CTTTGCCCGCGTCACCTTTCTTTCCGACAACCGCGCCGACCTGCCGCGCGTCACCGCCCGCTCGCTGGTGCTGCAATGCT
CGGAGGACGTGATCGCACCTCAGGCCGTGGGCGAATATGTCCATCGGCATCTTCCCGGCAGCGCCTATGTTCTCCTGCAG
GCCAGCGGCCATTGTCCCAATCTCAGTGCCCCGGAGGAGACCGTCGCCGCCATGAAGACCTTTCTTGAAACTGGTGCCGG
TTGA

Upstream 100 bases:

>100_bases
CGCGCAAGCCGGCCCTAACTTCCCATATCATCGGCAGCAAATCCTAACGCACAAGCGCGAGCAAGCCGGTTGAAAAAGGT
GCGGCGAGGCGAGGGGATCA

Downstream 100 bases:

>100_bases
GCGCACTGGGGACCATGGGCCACGAGCTCGACGATCTTGAAGACCTGTTCGAGAACGCGCCTTGCGGCTACATTTCGGCT
GGGCCGGATGGCCGGATCAC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSVIQRNNVKVLGSGEKAMVFGHGFGCDQNMWRFIWPAFAEEYRIVLFDHVGCGGSDLKAYDAGKYSSLEGYAEDIIEIC
RALYVTHGVFVGHSVSAMIGAMASVKAPDIFDNLVMIGPSPRYIDDAEYIGGFTEAQIHELLDFLDSNHMGWSQAMAPVI
MGNPDRPELGEELTNSFCMTDPEIAKRFARVTFLSDNRADLPRVTARSLVLQCSEDVIAPQAVGEYVHRHLPGSAYVLLQ
ASGHCPNLSAPEETVAAMKTFLETGAG

Sequences:

>Translated_267_residues
MSVIQRNNVKVLGSGEKAMVFGHGFGCDQNMWRFIWPAFAEEYRIVLFDHVGCGGSDLKAYDAGKYSSLEGYAEDIIEIC
RALYVTHGVFVGHSVSAMIGAMASVKAPDIFDNLVMIGPSPRYIDDAEYIGGFTEAQIHELLDFLDSNHMGWSQAMAPVI
MGNPDRPELGEELTNSFCMTDPEIAKRFARVTFLSDNRADLPRVTARSLVLQCSEDVIAPQAVGEYVHRHLPGSAYVLLQ
ASGHCPNLSAPEETVAAMKTFLETGAG
>Mature_266_residues
SVIQRNNVKVLGSGEKAMVFGHGFGCDQNMWRFIWPAFAEEYRIVLFDHVGCGGSDLKAYDAGKYSSLEGYAEDIIEICR
ALYVTHGVFVGHSVSAMIGAMASVKAPDIFDNLVMIGPSPRYIDDAEYIGGFTEAQIHELLDFLDSNHMGWSQAMAPVIM
GNPDRPELGEELTNSFCMTDPEIAKRFARVTFLSDNRADLPRVTARSLVLQCSEDVIAPQAVGEYVHRHLPGSAYVLLQA
SGHCPNLSAPEETVAAMKTFLETGAG

Specific function: Positive regulator required for energy stress activation of the sigma-B transcription factor. Could be required for rsbP phosphatase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29186; Mature: 29055

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIQRNNVKVLGSGEKAMVFGHGFGCDQNMWRFIWPAFAEEYRIVLFDHVGCGGSDLKA
CCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCC
YDAGKYSSLEGYAEDIIEICRALYVTHGVFVGHSVSAMIGAMASVKAPDIFDNLVMIGPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
PRYIDDAEYIGGFTEAQIHELLDFLDSNHMGWSQAMAPVIMGNPDRPELGEELTNSFCMT
CCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCHHHHHHHHHHCCC
DPEIAKRFARVTFLSDNRADLPRVTARSLVLQCSEDVIAPQAVGEYVHRHLPGSAYVLLQ
CHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEE
ASGHCPNLSAPEETVAAMKTFLETGAG
ECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVIQRNNVKVLGSGEKAMVFGHGFGCDQNMWRFIWPAFAEEYRIVLFDHVGCGGSDLKA
CCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCC
YDAGKYSSLEGYAEDIIEICRALYVTHGVFVGHSVSAMIGAMASVKAPDIFDNLVMIGPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
PRYIDDAEYIGGFTEAQIHELLDFLDSNHMGWSQAMAPVIMGNPDRPELGEELTNSFCMT
CCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCHHHHHHHHHHCCC
DPEIAKRFARVTFLSDNRADLPRVTARSLVLQCSEDVIAPQAVGEYVHRHLPGSAYVLLQ
CHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEE
ASGHCPNLSAPEETVAAMKTFLETGAG
ECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888; 11591687 [H]