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The map label for this gene is rsbP [H]

Identifier: 110636401

GI number: 110636401

Start: 4386585

End: 4386992

Strand: Reverse

Name: rsbP [H]

Synonym: Meso_4077

Alternate gene names: 110636401

Gene position: 4386992-4386585 (Counterclockwise)

Preceding gene: 110636402

Following gene: 110636400

Centisome position: 99.42

GC content: 61.52

Gene sequence:

>408_bases
TTGAGCGCACTGGGGACCATGGGCCACGAGCTCGACGATCTTGAAGACCTGTTCGAGAACGCGCCTTGCGGCTACATTTC
GGCTGGGCCGGATGGCCGGATCACCAAAGCGAACCTGACCTTCGCCAAATGGCTCGGTCGCGACCGCGGCGAGTTCGTCG
GCCGGCGCTTTCAGGATTTCCTGAACATAGCGGGCAAGATCTATTACGAAACCCATTTCGCGCCCCTGATGCGCATGCAG
GGCTTTTTCAACGAGGTGGCGCTCGATCTGGTGCGCGCCGACGGCACACTGCTGCCCGTGCTCGTCAACGCTGTGGAGCG
GCGTGACGATACCGGCAAGCTTCGCCTCATCCGTATCACCATTTTTCAACGCGTCCGACCGCCGCCGCTACGAGCGCGAG
TTGCTTGA

Upstream 100 bases:

>100_bases
GCGCCTATGTTCTCCTGCAGGCCAGCGGCCATTGTCCCAATCTCAGTGCCCCGGAGGAGACCGTCGCCGCCATGAAGACC
TTTCTTGAAACTGGTGCCGG

Downstream 100 bases:

>100_bases
AACCCGTCGGGCCGCCGAGAAGGCCAACGCCGAACTTCTCGAGCTCAACCGCACGCTGGAGGAGCGCATCGCCGAAGCCG
TCGAGGCCCGCATGAAGATT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSALGTMGHELDDLEDLFENAPCGYISAGPDGRITKANLTFAKWLGRDRGEFVGRRFQDFLNIAGKIYYETHFAPLMRMQ
GFFNEVALDLVRADGTLLPVLVNAVERRDDTGKLRLIRITIFQRVRPPPLRARVA

Sequences:

>Translated_135_residues
MSALGTMGHELDDLEDLFENAPCGYISAGPDGRITKANLTFAKWLGRDRGEFVGRRFQDFLNIAGKIYYETHFAPLMRMQ
GFFNEVALDLVRADGTLLPVLVNAVERRDDTGKLRLIRITIFQRVRPPPLRARVA
>Mature_134_residues
SALGTMGHELDDLEDLFENAPCGYISAGPDGRITKANLTFAKWLGRDRGEFVGRRFQDFLNIAGKIYYETHFAPLMRMQG
FFNEVALDLVRADGTLLPVLVNAVERRDDTGKLRLIRITIFQRVRPPPLRARVA

Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 15281; Mature: 15150

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALGTMGHELDDLEDLFENAPCGYISAGPDGRITKANLTFAKWLGRDRGEFVGRRFQDF
CCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHH
LNIAGKIYYETHFAPLMRMQGFFNEVALDLVRADGTLLPVLVNAVERRDDTGKLRLIRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEE
IFQRVRPPPLRARVA
EHHHCCCCCCCCCCC
>Mature Secondary Structure 
SALGTMGHELDDLEDLFENAPCGYISAGPDGRITKANLTFAKWLGRDRGEFVGRRFQDF
CCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHH
LNIAGKIYYETHFAPLMRMQGFFNEVALDLVRADGTLLPVLVNAVERRDDTGKLRLIRIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEE
IFQRVRPPPLRARVA
EHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888 [H]