| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is coaBC [H]
Identifier: 110636379
GI number: 110636379
Start: 4365025
End: 4366260
Strand: Reverse
Name: coaBC [H]
Synonym: Meso_4055
Alternate gene names: 110636379
Gene position: 4366260-4365025 (Counterclockwise)
Preceding gene: 110636380
Following gene: 110636377
Centisome position: 98.95
GC content: 64.24
Gene sequence:
>1236_bases TTGAGCCTTTCCGGTAAGCGCATCCTCCTCATTATCGGCGGCGGAATCGCAGCCTACAAGTGCCTCGATCTTATCCGCCG CTTGCGCGAGCGCGGGGCGAAGGTGCGGTGCGTGATGACGCAAGCCGCACAGGAATTCGTCACGCCCTTATCCGTTGGCG CGCTCACGGCTGACCATGTTTTCACCGATCTCTTTGACCGGCAGGACGAGCAGGATGTCGGCCATATCCGGCTGTCGCGG GAGGCCGACCTAATCGTGGCTGCGCCAGCGACCGCCGATCTGATGGCAAAGCTTGCAACGGGCCTTGCGAACGATCTTGC CTCGGCGGTGCTGCTTGCCACCGATAAGCCGGTGCTCATGGCGCCTGCCATGAACCCGAGAATGTGGATGCATCCCGCGA CGCAACGAAACTTGACGCAGCTCAAGGCCGACGGCGTGCGCTTTGTCGGCCCCAACAGCGGCGAAATGGCCGAAAGCGGC GAGGCCGGCGAAGGGCGCATGGCCGAGCCGCTGGAAATCGTAACGGCCATCGAAACCATTCTCGACGGCGGGAAAAGGCT CCTTACCGGCAGGAAGATCATCGTCACCTCGGGGCCGACCCGCGAGCCGATCGATCCGGTGCGCTACATCGCCAACCGCT CCTCCGGCAAGCAGGGCCATGCGATTGCCGCAGCACTCGCCGAGCTTGGGGCGGAGGTGCATCTCGTTTCGGGTCCGGTC GCCATTCCCGACCCGAAGGGTGTGGCGACAGTGCATGTTGAGAGCGCGCGCCAGATGCGTGACGCGGTGGAAGCGCTTCT GCCGGCCGATGCGGGCATCTTTGTCGCGGCGGTCGCGGACTGGCGCCCACTGACGGAAGTCGGGGAAAAGATCAAGAAGG ACAGGGGGGCGAACCCGCCTCCCCTGAAACTCGCCGAGAATCCCGATATCCTGGCCGGCGTGGGCCATCACGAGAACCGG CCGCGCCTCGTGATCGGCTTTGCCGCGGAAACGCAAAATCTGGTCGAGAATGCCCGCACGAAGCTCGCCAAGAAGGGCGC CGACCTCATCGTGGCCAATGATGTTTCCCATGATAGCGGCATCGGCCGTTCCGGCGTTATGGGCGGCGACCGGAACAAGG TACATATCGTTAGCCGCGACCGCGTCGAGGAGTGGCCGGAGGCAGGCAAGGAGGAGGTCGCCCGGCGGCTGGCGGCCAAG GTGGCGGAACTCTTAAACTCGAAGGCCAGGATGTGA
Upstream 100 bases:
>100_bases ATGAAGCTGCCGTTCTGAGGCCTGCCGCCGCTTTGCAAGGACGCCGAATTCGGCCATACCCTATGCGCCAGTTGAAACCA GGCGTGAAGGAAACGTCCCG
Downstream 100 bases:
>100_bases GTGGGCTGAAGCGGAGGGCCGTAGAAAATACCTGAAGGCAGAGAAAGCGGGATTCCTCCCCCGCTTCCCGCATCGCCGCT ATCGGCGTCTCCAAAATTCT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSLSGKRILLIIGGGIAAYKCLDLIRRLRERGAKVRCVMTQAAQEFVTPLSVGALTADHVFTDLFDRQDEQDVGHIRLSR EADLIVAAPATADLMAKLATGLANDLASAVLLATDKPVLMAPAMNPRMWMHPATQRNLTQLKADGVRFVGPNSGEMAESG EAGEGRMAEPLEIVTAIETILDGGKRLLTGRKIIVTSGPTREPIDPVRYIANRSSGKQGHAIAAALAELGAEVHLVSGPV AIPDPKGVATVHVESARQMRDAVEALLPADAGIFVAAVADWRPLTEVGEKIKKDRGANPPPLKLAENPDILAGVGHHENR PRLVIGFAAETQNLVENARTKLAKKGADLIVANDVSHDSGIGRSGVMGGDRNKVHIVSRDRVEEWPEAGKEEVARRLAAK VAELLNSKARM
Sequences:
>Translated_411_residues MSLSGKRILLIIGGGIAAYKCLDLIRRLRERGAKVRCVMTQAAQEFVTPLSVGALTADHVFTDLFDRQDEQDVGHIRLSR EADLIVAAPATADLMAKLATGLANDLASAVLLATDKPVLMAPAMNPRMWMHPATQRNLTQLKADGVRFVGPNSGEMAESG EAGEGRMAEPLEIVTAIETILDGGKRLLTGRKIIVTSGPTREPIDPVRYIANRSSGKQGHAIAAALAELGAEVHLVSGPV AIPDPKGVATVHVESARQMRDAVEALLPADAGIFVAAVADWRPLTEVGEKIKKDRGANPPPLKLAENPDILAGVGHHENR PRLVIGFAAETQNLVENARTKLAKKGADLIVANDVSHDSGIGRSGVMGGDRNKVHIVSRDRVEEWPEAGKEEVARRLAAK VAELLNSKARM >Mature_410_residues SLSGKRILLIIGGGIAAYKCLDLIRRLRERGAKVRCVMTQAAQEFVTPLSVGALTADHVFTDLFDRQDEQDVGHIRLSRE ADLIVAAPATADLMAKLATGLANDLASAVLLATDKPVLMAPAMNPRMWMHPATQRNLTQLKADGVRFVGPNSGEMAESGE AGEGRMAEPLEIVTAIETILDGGKRLLTGRKIIVTSGPTREPIDPVRYIANRSSGKQGHAIAAALAELGAEVHLVSGPVA IPDPKGVATVHVESARQMRDAVEALLPADAGIFVAAVADWRPLTEVGEKIKKDRGANPPPLKLAENPDILAGVGHHENRP RLVIGFAAETQNLVENARTKLAKKGADLIVANDVSHDSGIGRSGVMGGDRNKVHIVSRDRVEEWPEAGKEEVARRLAAKV AELLNSKARM
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=186, Percent_Identity=32.7956989247312, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI87082301, Length=416, Percent_Identity=46.3942307692308, Blast_Score=296, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17560194, Length=185, Percent_Identity=34.0540540540541, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24657262, Length=182, Percent_Identity=31.8681318681319, Blast_Score=82, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43854; Mature: 43723
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSGKRILLIIGGGIAAYKCLDLIRRLRERGAKVRCVMTQAAQEFVTPLSVGALTADHV CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHHHHHHHHHH FTDLFDRQDEQDVGHIRLSREADLIVAAPATADLMAKLATGLANDLASAVLLATDKPVLM HHHHHCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEE APAMNPRMWMHPATQRNLTQLKADGVRFVGPNSGEMAESGEAGEGRMAEPLEIVTAIETI ECCCCCCEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LDGGKRLLTGRKIIVTSGPTREPIDPVRYIANRSSGKQGHAIAAALAELGAEVHLVSGPV HCCCCEEECCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCE AIPDPKGVATVHVESARQMRDAVEALLPADAGIFVAAVADWRPLTEVGEKIKKDRGANPP ECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC PLKLAENPDILAGVGHHENRPRLVIGFAAETQNLVENARTKLAKKGADLIVANDVSHDSG CCEECCCCCEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC IGRSGVMGGDRNKVHIVSRDRVEEWPEAGKEEVARRLAAKVAELLNSKARM CCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLSGKRILLIIGGGIAAYKCLDLIRRLRERGAKVRCVMTQAAQEFVTPLSVGALTADHV CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHHHHHHHHHH FTDLFDRQDEQDVGHIRLSREADLIVAAPATADLMAKLATGLANDLASAVLLATDKPVLM HHHHHCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEE APAMNPRMWMHPATQRNLTQLKADGVRFVGPNSGEMAESGEAGEGRMAEPLEIVTAIETI ECCCCCCEEECCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LDGGKRLLTGRKIIVTSGPTREPIDPVRYIANRSSGKQGHAIAAALAELGAEVHLVSGPV HCCCCEEECCCEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCE AIPDPKGVATVHVESARQMRDAVEALLPADAGIFVAAVADWRPLTEVGEKIKKDRGANPP ECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC PLKLAENPDILAGVGHHENRPRLVIGFAAETQNLVENARTKLAKKGADLIVANDVSHDSG CCEECCCCCEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC IGRSGVMGGDRNKVHIVSRDRVEEWPEAGKEEVARRLAAKVAELLNSKARM CCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]