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The map label for this gene is yraN [C]

Identifier: 110636334

GI number: 110636334

Start: 4316108

End: 4316482

Strand: Reverse

Name: yraN [C]

Synonym: Meso_4010

Alternate gene names: 110636334

Gene position: 4316482-4316108 (Counterclockwise)

Preceding gene: 110636335

Following gene: 110636332

Centisome position: 97.83

GC content: 64.8

Gene sequence:

>375_bases
ATGGGCGCTGAGGCGCGTCTGAGCCGCCAGCGAGCATACCGAAAGGGCCACCGGGGCGAATGGCTGGCGGCGTTTGCCCT
GAGGCTTAAGGGCTATCGTATTCTGGCGCACCGCTTCAAGACACCCTTGGGCGAGATTGACCTGATCGCAAGGCGCGGGG
ACCTTGTTGCAATTGTGGAAGTTAAGGCACGGCCGACCTTGGGCGAGGCGATGGAGGCGGTCTCCTTTACCGCACAGAGG
CGGATCGACGCCGCTGCGGATCTATGGCTTTCGCGCCAGCCCGACTACGCGCGCCTCAGCCTGCGCTATGATCTCGTCGC
GGTGCTGCCGCGCCGCTGGCCCGTGCATGTGGAGAACATCTACGCCGCCCGCTAA

Upstream 100 bases:

>100_bases
GAAATGCCGGCTTCGAGAGCCGCGGGCGAAGCCGCCCGGATGACCGGGGGGAAGAAATCCGAACTGTACCAGCGCCTGCT
CGCGCTTAAGGAGGGCGGCG

Downstream 100 bases:

>100_bases
CGGCGGCTCACACCCATCGGCAGGCCACCCTGAGGCTGCGTGGTAAGCTTCTGCACCGGCCAGGGCTTGGTCTCGGGAAG
GAGATCGAACCGGTAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGAEARLSRQRAYRKGHRGEWLAAFALRLKGYRILAHRFKTPLGEIDLIARRGDLVAIVEVKARPTLGEAMEAVSFTAQR
RIDAAADLWLSRQPDYARLSLRYDLVAVLPRRWPVHVENIYAAR

Sequences:

>Translated_124_residues
MGAEARLSRQRAYRKGHRGEWLAAFALRLKGYRILAHRFKTPLGEIDLIARRGDLVAIVEVKARPTLGEAMEAVSFTAQR
RIDAAADLWLSRQPDYARLSLRYDLVAVLPRRWPVHVENIYAAR
>Mature_123_residues
GAEARLSRQRAYRKGHRGEWLAAFALRLKGYRILAHRFKTPLGEIDLIARRGDLVAIVEVKARPTLGEAMEAVSFTAQRR
IDAAADLWLSRQPDYARLSLRYDLVAVLPRRWPVHVENIYAAR

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4010_MESSB (Q11B48)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_676542.1
- ProteinModelPortal:   Q11B48
- STRING:   Q11B48
- GeneID:   4181157
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_4010
- NMPDR:   fig|266779.1.peg.3050
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- ProtClustDB:   PRK12497
- BioCyc:   MSP266779:MESO_4010-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14209; Mature: 14078

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAEARLSRQRAYRKGHRGEWLAAFALRLKGYRILAHRFKTPLGEIDLIARRGDLVAIVE
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEEEEE
VKARPTLGEAMEAVSFTAQRRIDAAADLWLSRQPDYARLSLRYDLVAVLPRRWPVHVENI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHEEECCCCCCEEECCE
YAAR
EECC
>Mature Secondary Structure 
GAEARLSRQRAYRKGHRGEWLAAFALRLKGYRILAHRFKTPLGEIDLIARRGDLVAIVE
CCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCEEEEEE
VKARPTLGEAMEAVSFTAQRRIDAAADLWLSRQPDYARLSLRYDLVAVLPRRWPVHVENI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHEEECCCCCCEEECCE
YAAR
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA