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The map label for this gene is rsmI [H]

Identifier: 110636335

GI number: 110636335

Start: 4316472

End: 4317383

Strand: Reverse

Name: rsmI [H]

Synonym: Meso_4011

Alternate gene names: 110636335

Gene position: 4317383-4316472 (Counterclockwise)

Preceding gene: 110636337

Following gene: 110636334

Centisome position: 97.85

GC content: 64.8

Gene sequence:

>912_bases
GTGGATTCCGACAACAGCGAAGAGCGCAGGTCTTTTGTTATCAAAGGCGCGGAGATCAATGCACCCCGGCTTGAACCGGC
GCTTTATCTCGTAGCGACGCCCATCGGCAACCTTTCCGACATAACCTTGCGCGCGCTGGAAACGCTCGCCGCCGCCGACG
TCCTTGCCTGCGAGGACACACGGGTGACCCGTATCCTGCTCAACCGCTACGGCATTCGTCGCCGCATGCTCGCCTATCAC
GAGCACAATGAAGCCGAAGCCGCCCCGCGCCTGGTTGCCATGGTAGAGGAGGGCAAAAGCGTAGCGCTCGCCAGCGATGC
GGGCACACCGCTCGTCTCCGATCCCGGGTTCAGGCTCGTGCAGGCGGCGCAGGAGAAAGGGATTCGGGTGGTGCCGGTGC
CGGGCCCATCCGCGGTGCTCGCCGCGCTGGCAGCCGCAGGCTTACCCACCGATTCATTCATGTTCGCGGGCTTCCTTCCT
TCCAAGGCGGGACAGCGCCGGACCCGCCTGGATGCTCTCGTTTCCGTGCCCGCAACACTTGTCTTCTTCGAATCTCCCCG
CCGGCTTTCCGAAAGCCTGTCGGCCATGGGCGAAAGCCTCGGAGACCGGCAAGCCGTCGTGGCGCGTGAATTGACCAAAG
CCTTCGAAGAGTTGCGGCGGGGAAGGCTTTCCGAATTGGCGGCGCATTACAACGAGGCGGGCGCGCCCAAAGGCGAGGTC
GTGGTCTGCGTTGCTCCGCCGGGCCAGGCAACCCTCGCGGGGCCTGAAGAAACAGACCGGCTGCTTCTTGCTCTTGCTGC
CGAAATGCCGGCTTCGAGAGCCGCGGGCGAAGCCGCCCGGATGACCGGGGGGAAGAAATCCGAACTGTACCAGCGCCTGC
TCGCGCTTAAGGAGGGCGGCGATGGGCGCTGA

Upstream 100 bases:

>100_bases
CCTTTATGAGATGCGGTCTGGCAGTGAATTTGCAACCCGCGGGCCGGCATGTCAAAGAGGTTGGCCGGCAAGATGTGGAC
AGCCGTGGGGAAGAGCGACG

Downstream 100 bases:

>100_bases
GGCGCGTCTGAGCCGCCAGCGAGCATACCGAAAGGGCCACCGGGGCGAATGGCTGGCGGCGTTTGCCCTGAGGCTTAAGG
GCTATCGTATTCTGGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDSDNSEERRSFVIKGAEINAPRLEPALYLVATPIGNLSDITLRALETLAAADVLACEDTRVTRILLNRYGIRRRMLAYH
EHNEAEAAPRLVAMVEEGKSVALASDAGTPLVSDPGFRLVQAAQEKGIRVVPVPGPSAVLAALAAAGLPTDSFMFAGFLP
SKAGQRRTRLDALVSVPATLVFFESPRRLSESLSAMGESLGDRQAVVARELTKAFEELRRGRLSELAAHYNEAGAPKGEV
VVCVAPPGQATLAGPEETDRLLLALAAEMPASRAAGEAARMTGGKKSELYQRLLALKEGGDGR

Sequences:

>Translated_303_residues
MDSDNSEERRSFVIKGAEINAPRLEPALYLVATPIGNLSDITLRALETLAAADVLACEDTRVTRILLNRYGIRRRMLAYH
EHNEAEAAPRLVAMVEEGKSVALASDAGTPLVSDPGFRLVQAAQEKGIRVVPVPGPSAVLAALAAAGLPTDSFMFAGFLP
SKAGQRRTRLDALVSVPATLVFFESPRRLSESLSAMGESLGDRQAVVARELTKAFEELRRGRLSELAAHYNEAGAPKGEV
VVCVAPPGQATLAGPEETDRLLLALAAEMPASRAAGEAARMTGGKKSELYQRLLALKEGGDGR
>Mature_303_residues
MDSDNSEERRSFVIKGAEINAPRLEPALYLVATPIGNLSDITLRALETLAAADVLACEDTRVTRILLNRYGIRRRMLAYH
EHNEAEAAPRLVAMVEEGKSVALASDAGTPLVSDPGFRLVQAAQEKGIRVVPVPGPSAVLAALAAAGLPTDSFMFAGFLP
SKAGQRRTRLDALVSVPATLVFFESPRRLSESLSAMGESLGDRQAVVARELTKAFEELRRGRLSELAAHYNEAGAPKGEV
VVCVAPPGQATLAGPEETDRLLLALAAEMPASRAAGEAARMTGGKKSELYQRLLALKEGGDGR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=275, Percent_Identity=48, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32237; Mature: 32237

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDNSEERRSFVIKGAEINAPRLEPALYLVATPIGNLSDITLRALETLAAADVLACEDT
CCCCCCHHHHHEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCH
RVTRILLNRYGIRRRMLAYHEHNEAEAAPRLVAMVEEGKSVALASDAGTPLVSDPGFRLV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
QAAQEKGIRVVPVPGPSAVLAALAAAGLPTDSFMFAGFLPSKAGQRRTRLDALVSVPATL
HHHHHCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEE
VFFESPRRLSESLSAMGESLGDRQAVVARELTKAFEELRRGRLSELAAHYNEAGAPKGEV
EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VVCVAPPGQATLAGPEETDRLLLALAAEMPASRAAGEAARMTGGKKSELYQRLLALKEGG
EEEECCCCCCEECCCCHHHHHHHHHHHHCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCC
DGR
CCC
>Mature Secondary Structure
MDSDNSEERRSFVIKGAEINAPRLEPALYLVATPIGNLSDITLRALETLAAADVLACEDT
CCCCCCHHHHHEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCH
RVTRILLNRYGIRRRMLAYHEHNEAEAAPRLVAMVEEGKSVALASDAGTPLVSDPGFRLV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
QAAQEKGIRVVPVPGPSAVLAALAAAGLPTDSFMFAGFLPSKAGQRRTRLDALVSVPATL
HHHHHCCCEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEE
VFFESPRRLSESLSAMGESLGDRQAVVARELTKAFEELRRGRLSELAAHYNEAGAPKGEV
EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VVCVAPPGQATLAGPEETDRLLLALAAEMPASRAAGEAARMTGGKKSELYQRLLALKEGG
EEEECCCCCCEECCCCHHHHHHHHHHHHCCCHHHCCHHHHHCCCCHHHHHHHHHHHHCCC
DGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]