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The map label for this gene is 110636233

Identifier: 110636233

GI number: 110636233

Start: 4210202

End: 4210675

Strand: Reverse

Name: 110636233

Synonym: Meso_3909

Alternate gene names: NA

Gene position: 4210675-4210202 (Counterclockwise)

Preceding gene: 110636234

Following gene: 110636232

Centisome position: 95.43

GC content: 61.81

Gene sequence:

>474_bases
ATGAAAAACACCATTGCAGGAGCCGCGCTGCTATGCGCCGCAATGCCACTCACCGCCGCCGCTGAAGAACAAGGCCAGCA
GATCACGCGGGCGGGAGAGCAAGCCTCTACATATGGCTCGGCAGATTATTTCACCGGCCGGGTGCGCGTCGATCCGTTGT
TCTCTCCCAATGAAAGCATCAATGCGTCGGGCGCTTACGTGACATTCGAGCCGGGTGCGCGCTCCGCATGGCATACCCAC
CCAGCGGGCCAGCGCCTGGTGGTGACGTCCGGGATCGGCCTGACCCAGGAATGGGGGAAGGACGTTGAGGTTATTCGCCA
GGGCGATGTGGTGTGGTGCCCGCCCGGTGTGAAGCATTGGCACGGGGCCGCTCCGAACAGCGCCATGACTCACCTGGCCG
TGGGAAGCACTGTGGATGGACAGAGCGTGACTTGGATGGAGCACGTCACCGACGAAGAATACAACACCCGTTAA

Upstream 100 bases:

>100_bases
GGACCTTCTGCCCAGACGGGCGAGAGGACCGACTCTGCGCCTGCCCCCATCCCCTACAGAAACAGCGCTTCGAAGGCGCT
AGCCGGAAAGGTCCACGATC

Downstream 100 bases:

>100_bases
ACAGGTGACTGCGCGCGGCGTTGATCTGGCGCGTCTTGGATCGAGGACGCGGCGCGGCTGAGCATCGCATCGCTAAAGCC
GGCGAGCACATATCGGTGCA

Product: cupin 2, barrel

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin Family Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; ABC-2 Type Transporter; Secreted Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKNTIAGAALLCAAMPLTAAAEEQGQQITRAGEQASTYGSADYFTGRVRVDPLFSPNESINASGAYVTFEPGARSAWHTH
PAGQRLVVTSGIGLTQEWGKDVEVIRQGDVVWCPPGVKHWHGAAPNSAMTHLAVGSTVDGQSVTWMEHVTDEEYNTR

Sequences:

>Translated_157_residues
MKNTIAGAALLCAAMPLTAAAEEQGQQITRAGEQASTYGSADYFTGRVRVDPLFSPNESINASGAYVTFEPGARSAWHTH
PAGQRLVVTSGIGLTQEWGKDVEVIRQGDVVWCPPGVKHWHGAAPNSAMTHLAVGSTVDGQSVTWMEHVTDEEYNTR
>Mature_157_residues
MKNTIAGAALLCAAMPLTAAAEEQGQQITRAGEQASTYGSADYFTGRVRVDPLFSPNESINASGAYVTFEPGARSAWHTH
PAGQRLVVTSGIGLTQEWGKDVEVIRQGDVVWCPPGVKHWHGAAPNSAMTHLAVGSTVDGQSVTWMEHVTDEEYNTR

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16796; Mature: 16796

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTIAGAALLCAAMPLTAAAEEQGQQITRAGEQASTYGSADYFTGRVRVDPLFSPNESI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCEEECEEEECCCCCCCCCC
NASGAYVTFEPGARSAWHTHPAGQRLVVTSGIGLTQEWGKDVEVIRQGDVVWCPPGVKHW
CCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCEEEEECCCEEECCCCCCCC
HGAAPNSAMTHLAVGSTVDGQSVTWMEHVTDEEYNTR
CCCCCCCCEEEEEECCCCCCCCEEHHHHHCCCCCCCC
>Mature Secondary Structure
MKNTIAGAALLCAAMPLTAAAEEQGQQITRAGEQASTYGSADYFTGRVRVDPLFSPNESI
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCEEECEEEECCCCCCCCCC
NASGAYVTFEPGARSAWHTHPAGQRLVVTSGIGLTQEWGKDVEVIRQGDVVWCPPGVKHW
CCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCEEEEECCCEEECCCCCCCC
HGAAPNSAMTHLAVGSTVDGQSVTWMEHVTDEEYNTR
CCCCCCCCEEEEEECCCCCCCCEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA