Click here to switch to the map view.

The map label for this gene is 110636234

Identifier: 110636234

GI number: 110636234

Start: 4210795

End: 4211589

Strand: Reverse

Name: 110636234

Synonym: Meso_3910

Alternate gene names: NA

Gene position: 4211589-4210795 (Counterclockwise)

Preceding gene: 110636235

Following gene: 110636233

Centisome position: 95.45

GC content: 62.89

Gene sequence:

>795_bases
ATGAAACGAGCTGCACTTGCTTTCGCGCTTGCGTTCGCCGGAGCAACACACGCCCAGGCCCAGTCACAACCGCCCACCGA
TCAACAGGCGCAACCGCAGCAGGGGACGCAGCAGCAGAACCAGACGCGTCCATCGGGTCCGCTTCAGCAGAAGCTCGTGC
CGGGAATGGCCAGATACACCGACGAGGTGCTGTTCGGTGAGATATGGCCAGGAGAGGGTCTTTCGCCGCGTGACCGCAGC
CTCGCCGTTATTTCAGTCCTGATCGCCACCAACAAGCCGGCGCAGCTTCGCGGCCATCTCGGTCGTGCATTGACCAACGG
GGTCACGCCCATGGAAGCGTCGGGCGTCCTGACCCACCTTGCCATTTACTCGGGCTGGCCGAATGCGGTCTCGGCGCTCG
AAGTGTATGATGAGGTCTACACCGAGCGGGATGTGGATTTCGCTGCGCTTCAAGCGGAGCTTGAGCCGCTTTCGTCTTCC
TCTGAGACCGATGACGCGGCAAACGCACAGCTCGAAGCCGTCGCGCCGAAGTTCGCGGACCTTACCGATCGGATTGTCCA
CGGCGACCTCTGGTCCCGGCCTGACCTGAGCGTTCGCGATCGCAGCCTCGTCACGATCGCTGCCCTCACCGGCACAGGCG
ATATCGACCTGATGGAGCCGTATTTGCGTCGCGGCATAGAGGCCGGGCTTACTCGCGACGAGATCGCGGAAGCTCTGACG
CATCTCGCCTTTTACGCCGGCTGGGGGAAGGCCACCAAGGCTTTGACGGTCGTAACCGAGACCTTGGGGGGCTGA

Upstream 100 bases:

>100_bases
ATCATCATCAACGATGTGCCATCGATCGCGCAGCGGACCACGGCCCGCATGTCGGTCTGCTGCGAGATCCTGAACATCCC
AAAAAGACTGGAAAATCGAT

Downstream 100 bases:

>100_bases
TCTTTTCAGTGCAGCCGCGGGACCTTCTGCCCAGACGGGCGAGAGGACCGACTCTGCGCCTGCCCCCATCCCCTACAGAA
ACAGCGCTTCGAAGGCGCTA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; 4-Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Protein; Decarboxylase

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKRAALAFALAFAGATHAQAQSQPPTDQQAQPQQGTQQQNQTRPSGPLQQKLVPGMARYTDEVLFGEIWPGEGLSPRDRS
LAVISVLIATNKPAQLRGHLGRALTNGVTPMEASGVLTHLAIYSGWPNAVSALEVYDEVYTERDVDFAALQAELEPLSSS
SETDDAANAQLEAVAPKFADLTDRIVHGDLWSRPDLSVRDRSLVTIAALTGTGDIDLMEPYLRRGIEAGLTRDEIAEALT
HLAFYAGWGKATKALTVVTETLGG

Sequences:

>Translated_264_residues
MKRAALAFALAFAGATHAQAQSQPPTDQQAQPQQGTQQQNQTRPSGPLQQKLVPGMARYTDEVLFGEIWPGEGLSPRDRS
LAVISVLIATNKPAQLRGHLGRALTNGVTPMEASGVLTHLAIYSGWPNAVSALEVYDEVYTERDVDFAALQAELEPLSSS
SETDDAANAQLEAVAPKFADLTDRIVHGDLWSRPDLSVRDRSLVTIAALTGTGDIDLMEPYLRRGIEAGLTRDEIAEALT
HLAFYAGWGKATKALTVVTETLGG
>Mature_264_residues
MKRAALAFALAFAGATHAQAQSQPPTDQQAQPQQGTQQQNQTRPSGPLQQKLVPGMARYTDEVLFGEIWPGEGLSPRDRS
LAVISVLIATNKPAQLRGHLGRALTNGVTPMEASGVLTHLAIYSGWPNAVSALEVYDEVYTERDVDFAALQAELEPLSSS
SETDDAANAQLEAVAPKFADLTDRIVHGDLWSRPDLSVRDRSLVTIAALTGTGDIDLMEPYLRRGIEAGLTRDEIAEALT
HLAFYAGWGKATKALTVVTETLGG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28317; Mature: 28317

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAALAFALAFAGATHAQAQSQPPTDQQAQPQQGTQQQNQTRPSGPLQQKLVPGMARYT
CCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHH
DEVLFGEIWPGEGLSPRDRSLAVISVLIATNKPAQLRGHLGRALTNGVTPMEASGVLTHL
HHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AIYSGWPNAVSALEVYDEVYTERDVDFAALQAELEPLSSSSETDDAANAQLEAVAPKFAD
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHCCHHHH
LTDRIVHGDLWSRPDLSVRDRSLVTIAALTGTGDIDLMEPYLRRGIEAGLTRDEIAEALT
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
HLAFYAGWGKATKALTVVTETLGG
HHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRAALAFALAFAGATHAQAQSQPPTDQQAQPQQGTQQQNQTRPSGPLQQKLVPGMARYT
CCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHH
DEVLFGEIWPGEGLSPRDRSLAVISVLIATNKPAQLRGHLGRALTNGVTPMEASGVLTHL
HHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AIYSGWPNAVSALEVYDEVYTERDVDFAALQAELEPLSSSSETDDAANAQLEAVAPKFAD
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHHCCHHHH
LTDRIVHGDLWSRPDLSVRDRSLVTIAALTGTGDIDLMEPYLRRGIEAGLTRDEIAEALT
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
HLAFYAGWGKATKALTVVTETLGG
HHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA