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The map label for this gene is 110636043

Identifier: 110636043

GI number: 110636043

Start: 4011727

End: 4012590

Strand: Reverse

Name: 110636043

Synonym: Meso_3718

Alternate gene names: NA

Gene position: 4012590-4011727 (Counterclockwise)

Preceding gene: 110636044

Following gene: 110636042

Centisome position: 90.94

GC content: 61.11

Gene sequence:

>864_bases
ATGCATGATCGCAAAACCATTCTGAAACGCCTTCGTTCAACAATTGCCGATGGCAAGGCCATCGTGGGCGCAGGCGCGGG
AACCGGGCTTTCAGGGAAATGCGCGGAAGCGGGCGGCGTCGATCTGATCATCATTTATAATTCGGGCAGATACCGGATGG
CCGGCCGCGGCTCGCTTGCCGGATTGATGCCTTATGGCGACGCCAATGCAATCGTCATGGACATGGCGCGCGAGGTGCTG
ACTATCGTGAAGGACACTCCGGTTCTGGCAGGTGTGTGCGGGACCGATCCTTTCCGCCTCATGCCGATCTTTCTTCGCCA
GGTTGCCGATGCCGGCTTTGCCGGTGTTCAGAACTTTCCGACCGTGGGACTGATCGACGGTACATTCCGCGAGAATCTCG
AGGGCACCGGCATGGGGTTCGGCCTTGAGGTGGAAATGATCGCCCGGGCGCACGAGCTTGACTTGCTTACCTGCCCATAC
GTGTTCGATCCAGAGCAGGCGCGTCAGATGGCGGCGGTTGGCGCCGACATTATCGTCGCCCACATGGGTCTGACCACCTC
GGGGACGATCGGCGCTTCCGTAGCGATGTCACTCGAAGACGCTGTTGCCCGCGTGCAGGAGATTCGTGATGCCGCGGCAG
AGGTGCGCAACGATATCATAGTGCTGTGCCACGGCGGCCCGATCGCGATGCCCGCGGACGCGGAATTCGTGCTTTCGCGA
ACCAAAGGCGTCGCGGGCTTTTTTGGCGCATCAAGCCTCGAGCGGCTGCCTACCGAGACAGCGATGACGGAGACCGCGCG
CGCGTTCAAGGCTGTGGGGCATGCTGCCCGTCAGCCCGCTTCCGAAGACGGAAATCTCAAATGA

Upstream 100 bases:

>100_bases
GAGATCCGCGAGTTCAATACCGACATCAATGATCCCTCCTTCGCGGAAGCAATGGTGGAGGCGCTTATCGAGATAATGGC
CGAAAAGAAGGTCAATGCTC

Downstream 100 bases:

>100_bases
CACGACTGACCGTGTTGAACTCGATGGCTTCCGCGGACTTCTCAGAGTCAATCGAGATACAGAAAAGCTGGGGCATTCGC
GACCTTGATCTTCGGGATTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MHDRKTILKRLRSTIADGKAIVGAGAGTGLSGKCAEAGGVDLIIIYNSGRYRMAGRGSLAGLMPYGDANAIVMDMAREVL
TIVKDTPVLAGVCGTDPFRLMPIFLRQVADAGFAGVQNFPTVGLIDGTFRENLEGTGMGFGLEVEMIARAHELDLLTCPY
VFDPEQARQMAAVGADIIVAHMGLTTSGTIGASVAMSLEDAVARVQEIRDAAAEVRNDIIVLCHGGPIAMPADAEFVLSR
TKGVAGFFGASSLERLPTETAMTETARAFKAVGHAARQPASEDGNLK

Sequences:

>Translated_287_residues
MHDRKTILKRLRSTIADGKAIVGAGAGTGLSGKCAEAGGVDLIIIYNSGRYRMAGRGSLAGLMPYGDANAIVMDMAREVL
TIVKDTPVLAGVCGTDPFRLMPIFLRQVADAGFAGVQNFPTVGLIDGTFRENLEGTGMGFGLEVEMIARAHELDLLTCPY
VFDPEQARQMAAVGADIIVAHMGLTTSGTIGASVAMSLEDAVARVQEIRDAAAEVRNDIIVLCHGGPIAMPADAEFVLSR
TKGVAGFFGASSLERLPTETAMTETARAFKAVGHAARQPASEDGNLK
>Mature_287_residues
MHDRKTILKRLRSTIADGKAIVGAGAGTGLSGKCAEAGGVDLIIIYNSGRYRMAGRGSLAGLMPYGDANAIVMDMAREVL
TIVKDTPVLAGVCGTDPFRLMPIFLRQVADAGFAGVQNFPTVGLIDGTFRENLEGTGMGFGLEVEMIARAHELDLLTCPY
VFDPEQARQMAAVGADIIVAHMGLTTSGTIGASVAMSLEDAVARVQEIRDAAAEVRNDIIVLCHGGPIAMPADAEFVLSR
TKGVAGFFGASSLERLPTETAMTETARAFKAVGHAARQPASEDGNLK

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 30083; Mature: 30083

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDRKTILKRLRSTIADGKAIVGAGAGTGLSGKCAEAGGVDLIIIYNSGRYRMAGRGSLA
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCE
GLMPYGDANAIVMDMAREVLTIVKDTPVLAGVCGTDPFRLMPIFLRQVADAGFAGVQNFP
EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
TVGLIDGTFRENLEGTGMGFGLEVEMIARAHELDLLTCPYVFDPEQARQMAAVGADIIVA
EEEEECCHHHHCCCCCCCCCCEEHHHHHHHHHCCEEECCCEECHHHHHHHHHHCHHHEEE
HMGLTTSGTIGASVAMSLEDAVARVQEIRDAAAEVRNDIIVLCHGGPIAMPADAEFVLSR
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHH
TKGVAGFFGASSLERLPTETAMTETARAFKAVGHAARQPASEDGNLK
HCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHDRKTILKRLRSTIADGKAIVGAGAGTGLSGKCAEAGGVDLIIIYNSGRYRMAGRGSLA
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCE
GLMPYGDANAIVMDMAREVLTIVKDTPVLAGVCGTDPFRLMPIFLRQVADAGFAGVQNFP
EECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
TVGLIDGTFRENLEGTGMGFGLEVEMIARAHELDLLTCPYVFDPEQARQMAAVGADIIVA
EEEEECCHHHHCCCCCCCCCCEEHHHHHHHHHCCEEECCCEECHHHHHHHHHHCHHHEEE
HMGLTTSGTIGASVAMSLEDAVARVQEIRDAAAEVRNDIIVLCHGGPIAMPADAEFVLSR
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHH
TKGVAGFFGASSLERLPTETAMTETARAFKAVGHAARQPASEDGNLK
HCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]