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The map label for this gene is 110636044

Identifier: 110636044

GI number: 110636044

Start: 4012583

End: 4013815

Strand: Reverse

Name: 110636044

Synonym: Meso_3719

Alternate gene names: NA

Gene position: 4013815-4012583 (Counterclockwise)

Preceding gene: 110636059

Following gene: 110636043

Centisome position: 90.97

GC content: 61.07

Gene sequence:

>1233_bases
ATGTCTACTGTTGTGCTCATGGGCACGCTCGATACGAAAGGCGCGGAATATGCCTTTTTGCGTGACGAGATCGAAAAGCA
GGGGATTGAAACCCTTCTTGTGGATACAGGGATCCTCGGGGATCCATCGACCCGGCCCGACATATCCAGAAGCGTGGTGG
CAGAGGCGGCCGACGCCGACCTTGCGGCCCTTATAGAGGCTCACGATCGCGGTGCCGCCGTTTCGGCGATGGCCAAGGGC
GCCGCAGCTCTTGCGCTGCGCCTCTATGAGGAAGGCAAGCTGGACGCGATCGCCGGGCTGGGCGGCACCGGTGGAACCGC
CTTGGTGACCGCTGCCATGAGAGCACTGCCGATTGGCGTGCCGAAGCTGATGGTTTCGACGGTGGCTTCCGGCGACACGC
GTGCCTATGTCGGCTCAACGGACATTACGATGATGCACTCGGTGGTCGACATCGCGGGCATCAACAAAATTTCCCGCAAA
ATACTCGGAAACGCCGCAGGCGCTGTTGCAGGCATGGCGGGACAGCCCGTGACCGACGCGCCATCGCGTGAGGCACCGCT
GATCGCCGCCACAATGTTTGGCGTGACGACGCCGTGTGTCCAGAAGGCCCGTGAATTGCTCGAGCGGAGCGGCTTCGAAG
TTCTCACCTTTCATGCGACCGGAACCGGCGGGCGCTCGATGGAGGAACTCACGAAAGCAGGAATGTTCTCAGCCGTGCTC
GACGTGACGACGACCGAACTCGCAGATGAACTCGTCGGAGGCGTTTTCTCAGCAGGGCCGGACCGGCTGACGGCCGCCGG
CGCGGCTGGCATTCCGCAGATCGTCAGCCTCGGCGCGCTGGATATGGTCAATTTCGGCGCATGGGAGACGGTTCCGGAAA
AATTCCGGGAGCGGAATCTGTATCGCCACAACGCTTCGATTACCCTGATGCGGACTACGCCACAGGAGTGCCTGGAAATC
GGAAGGCGGCTCGGTTCGCGTCTTAGCCAGTCAAAAGGGCCCACCGTGGTTTTCGTGCCGCTCAAGGGCATTTCGCTCAT
CGCGCGTGCGGGCCAGCCCTTCCACGATCCCGAAGCCGATAATGCGCTGCTGCGTGGGCTGCGTGAGTCGTTGCGTGCCG
ACATCGAGATCCGCGAGTTCAATACCGACATCAATGATCCCTCCTTCGCGGAAGCAATGGTGGAGGCGCTTATCGAGATA
ATGGCCGAAAAGAAGGTCAATGCTCATGCATGA

Upstream 100 bases:

>100_bases
CGGGGATGGTATTTGGTATACCAAACGCCAAGTGCTGACGGCTCGGGAGATTCCTGCACGTTGAGGCTGGTGGACCGTTG
GTGAGCGAGGGAGGAGCCGC

Downstream 100 bases:

>100_bases
TCGCAAAACCATTCTGAAACGCCTTCGTTCAACAATTGCCGATGGCAAGGCCATCGTGGGCGCAGGCGCGGGAACCGGGC
TTTCAGGGAAATGCGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSTVVLMGTLDTKGAEYAFLRDEIEKQGIETLLVDTGILGDPSTRPDISRSVVAEAADADLAALIEAHDRGAAVSAMAKG
AAALALRLYEEGKLDAIAGLGGTGGTALVTAAMRALPIGVPKLMVSTVASGDTRAYVGSTDITMMHSVVDIAGINKISRK
ILGNAAGAVAGMAGQPVTDAPSREAPLIAATMFGVTTPCVQKARELLERSGFEVLTFHATGTGGRSMEELTKAGMFSAVL
DVTTTELADELVGGVFSAGPDRLTAAGAAGIPQIVSLGALDMVNFGAWETVPEKFRERNLYRHNASITLMRTTPQECLEI
GRRLGSRLSQSKGPTVVFVPLKGISLIARAGQPFHDPEADNALLRGLRESLRADIEIREFNTDINDPSFAEAMVEALIEI
MAEKKVNAHA

Sequences:

>Translated_410_residues
MSTVVLMGTLDTKGAEYAFLRDEIEKQGIETLLVDTGILGDPSTRPDISRSVVAEAADADLAALIEAHDRGAAVSAMAKG
AAALALRLYEEGKLDAIAGLGGTGGTALVTAAMRALPIGVPKLMVSTVASGDTRAYVGSTDITMMHSVVDIAGINKISRK
ILGNAAGAVAGMAGQPVTDAPSREAPLIAATMFGVTTPCVQKARELLERSGFEVLTFHATGTGGRSMEELTKAGMFSAVL
DVTTTELADELVGGVFSAGPDRLTAAGAAGIPQIVSLGALDMVNFGAWETVPEKFRERNLYRHNASITLMRTTPQECLEI
GRRLGSRLSQSKGPTVVFVPLKGISLIARAGQPFHDPEADNALLRGLRESLRADIEIREFNTDINDPSFAEAMVEALIEI
MAEKKVNAHA
>Mature_409_residues
STVVLMGTLDTKGAEYAFLRDEIEKQGIETLLVDTGILGDPSTRPDISRSVVAEAADADLAALIEAHDRGAAVSAMAKGA
AALALRLYEEGKLDAIAGLGGTGGTALVTAAMRALPIGVPKLMVSTVASGDTRAYVGSTDITMMHSVVDIAGINKISRKI
LGNAAGAVAGMAGQPVTDAPSREAPLIAATMFGVTTPCVQKARELLERSGFEVLTFHATGTGGRSMEELTKAGMFSAVLD
VTTTELADELVGGVFSAGPDRLTAAGAAGIPQIVSLGALDMVNFGAWETVPEKFRERNLYRHNASITLMRTTPQECLEIG
RRLGSRLSQSKGPTVVFVPLKGISLIARAGQPFHDPEADNALLRGLRESLRADIEIREFNTDINDPSFAEAMVEALIEIM
AEKKVNAHA

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 43000; Mature: 42869

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVVLMGTLDTKGAEYAFLRDEIEKQGIETLLVDTGILGDPSTRPDISRSVVAEAADAD
CCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCH
LAALIEAHDRGAAVSAMAKGAAALALRLYEEGKLDAIAGLGGTGGTALVTAAMRALPIGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCH
PKLMVSTVASGDTRAYVGSTDITMMHSVVDIAGINKISRKILGNAAGAVAGMAGQPVTDA
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PSREAPLIAATMFGVTTPCVQKARELLERSGFEVLTFHATGTGGRSMEELTKAGMFSAVL
CCCCCCEEHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
DVTTTELADELVGGVFSAGPDRLTAAGAAGIPQIVSLGALDMVNFGAWETVPEKFRERNL
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHCCC
YRHNASITLMRTTPQECLEIGRRLGSRLSQSKGPTVVFVPLKGISLIARAGQPFHDPEAD
EEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCH
NALLRGLRESLRADIEIREFNTDINDPSFAEAMVEALIEIMAEKKVNAHA
HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STVVLMGTLDTKGAEYAFLRDEIEKQGIETLLVDTGILGDPSTRPDISRSVVAEAADAD
CEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCH
LAALIEAHDRGAAVSAMAKGAAALALRLYEEGKLDAIAGLGGTGGTALVTAAMRALPIGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCH
PKLMVSTVASGDTRAYVGSTDITMMHSVVDIAGINKISRKILGNAAGAVAGMAGQPVTDA
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PSREAPLIAATMFGVTTPCVQKARELLERSGFEVLTFHATGTGGRSMEELTKAGMFSAVL
CCCCCCEEHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
DVTTTELADELVGGVFSAGPDRLTAAGAAGIPQIVSLGALDMVNFGAWETVPEKFRERNL
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHCCC
YRHNASITLMRTTPQECLEIGRRLGSRLSQSKGPTVVFVPLKGISLIARAGQPFHDPEAD
EEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCH
NALLRGLRESLRADIEIREFNTDINDPSFAEAMVEALIEIMAEKKVNAHA
HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]