Click here to switch to the map view.

The map label for this gene is yfeT [C]

Identifier: 110636027

GI number: 110636027

Start: 3995002

End: 3995925

Strand: Reverse

Name: yfeT [C]

Synonym: Meso_3702

Alternate gene names: 110636027

Gene position: 3995925-3995002 (Counterclockwise)

Preceding gene: 110636028

Following gene: 110636026

Centisome position: 90.56

GC content: 56.6

Gene sequence:

>924_bases
ATGGCCGCCGAAAACAAATCCATCGACGCGATTCTGGATCCGGTGATAGAGCCGCCGACATCGGCCGACGGCCTCATTAA
TCTCATCCGGCTTCGCCGCATGTCGATGCCGCAGAAGCTGCGCGCCGTTGCCGACTTCATCATCGAGCGAGCGCATGAGG
TTCCGATACACTCGATTACCGAACTCGCGCGTATGCTGGATATTGCGCCGTCGGCAATCGTTCGCTTCGCCAAGCTGCTT
GGATTCAGCGGCTTTTCGGAGATGCAGAGGCTCCTCCGCTCCCAGGCGATTACAGGACAGAACTCCTATGTCGGCCTGAC
CAGCAAACTGACCCGACCCGGGGCCGGTCAGGTTTCAACGATAGGACATGTGCTCGACGCGTTTTTCGATGCCAACATAT
CGGCGCTTCAGGCCTGTCGTGCCGAAGTGGATGTCCAGGAGATGGAGAAAATCGTCGAGGCCATGGCTTCGGCCAACCTG
ATCGCGGTCATCGGCCAAAAGCGGGCATTTCCGCTGGCGTCCTACCTCTTTTACGGCCTGTCGATGTTGGGCTGCAAAAC
CGTCCTGTTCGACGGGCCCGGTGGCCTGCTACAGCGCCAGGCGGCCATTCTCGACAAGAACGATGTCCTCATTACAATCA
GTTTCGCCAAGTATGCCGAAGATGTCATCGCGACCGCGCGGGCAGCAAAAGAGGCCAATGTCGAGGTGATCGCCATCACC
GACAGTAAGGAAAGCCCGCTGGCTGACATCGCAACAAGAGCGCTGTTTGTCCAGGATTCCAACTTGAACGGGATCCGATC
GATATCGGTGACATCCACAATTCTCCAATCCCTGTTCGTTGGTCTCGGCATCCGCATCGAGAACAAGCAGGCTTTGAACA
AAAATCGAGAGAACAATGCAAGGCATCACCAAACTGAGCAATGA

Upstream 100 bases:

>100_bases
CGGACGAAGAAACCGTCAATGAGATCAAGGGGAACTACGCGAAGGTGGTGGATATGTGGAGCTCTACAAAGCAAAGCACG
TCGATAGCCGAGGTGGCTTG

Downstream 100 bases:

>100_bases
GTCCGGCGAGATGGACCTGATCGAGTTCCCTCGGCCAATCGCAGGACACGGCAACGTTGTGCTGGAGGTTGCCGCCGCTG
GTATTTGCGGCACGGACATC

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain-Containing Protein; Transcriptional Regulator Protein; SIS Domain Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; Transcription Regulator Protein; RpiR-Family Transcriptional Regulator; N-Acetylmannosamine Kinase; Transcriptional Regulator RpiR Family Protein; Helix-Turn-Helix Domain RpiR Family; N-Acylmannosamine Kinase; Conserved Hypothethical Protein; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Transcriptional Regulator RpiR Family SIS Domain; SIS Family Regulator; Bifunctional Protein Glk; Transcriptional Regulator IolR; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; Transcription Regulator; RipR Family Transcriptional Regulator; Transcriptional Regulator Family Protein; RpiR Family Transcription Regulator Protein; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAAENKSIDAILDPVIEPPTSADGLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLL
GFSGFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEVDVQEMEKIVEAMASANL
IAVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAILDKNDVLITISFAKYAEDVIATARAAKEANVEVIAIT
DSKESPLADIATRALFVQDSNLNGIRSISVTSTILQSLFVGLGIRIENKQALNKNRENNARHHQTEQ

Sequences:

>Translated_307_residues
MAAENKSIDAILDPVIEPPTSADGLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLL
GFSGFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEVDVQEMEKIVEAMASANL
IAVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAILDKNDVLITISFAKYAEDVIATARAAKEANVEVIAIT
DSKESPLADIATRALFVQDSNLNGIRSISVTSTILQSLFVGLGIRIENKQALNKNRENNARHHQTEQ
>Mature_306_residues
AAENKSIDAILDPVIEPPTSADGLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSITELARMLDIAPSAIVRFAKLLG
FSGFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVSTIGHVLDAFFDANISALQACRAEVDVQEMEKIVEAMASANLI
AVIGQKRAFPLASYLFYGLSMLGCKTVLFDGPGGLLQRQAAILDKNDVLITISFAKYAEDVIATARAAKEANVEVIAITD
SKESPLADIATRALFVQDSNLNGIRSISVTSTILQSLFVGLGIRIENKQALNKNRENNARHHQTEQ

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788767, Length=251, Percent_Identity=27.8884462151394, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33371; Mature: 33240

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAENKSIDAILDPVIEPPTSADGLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSIT
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
ELARMLDIAPSAIVRFAKLLGFSGFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVST
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHHH
IGHVLDAFFDANISALQACRAEVDVQEMEKIVEAMASANLIAVIGQKRAFPLASYLFYGL
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
SMLGCKTVLFDGPGGLLQRQAAILDKNDVLITISFAKYAEDVIATARAAKEANVEVIAIT
HHHHHHEEEEECCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEE
DSKESPLADIATRALFVQDSNLNGIRSISVTSTILQSLFVGLGIRIENKQALNKNRENNA
CCCCCCHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCC
RHHQTEQ
CCCCCCC
>Mature Secondary Structure 
AAENKSIDAILDPVIEPPTSADGLINLIRLRRMSMPQKLRAVADFIIERAHEVPIHSIT
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
ELARMLDIAPSAIVRFAKLLGFSGFSEMQRLLRSQAITGQNSYVGLTSKLTRPGAGQVST
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHHH
IGHVLDAFFDANISALQACRAEVDVQEMEKIVEAMASANLIAVIGQKRAFPLASYLFYGL
HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
SMLGCKTVLFDGPGGLLQRQAAILDKNDVLITISFAKYAEDVIATARAAKEANVEVIAIT
HHHHHHEEEEECCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEE
DSKESPLADIATRALFVQDSNLNGIRSISVTSTILQSLFVGLGIRIENKQALNKNRENNA
CCCCCCHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCC
RHHQTEQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA