Click here to switch to the map view.

The map label for this gene is 110633104

Identifier: 110633104

GI number: 110633104

Start: 822517

End: 823269

Strand: Direct

Name: 110633104

Synonym: Meso_0747

Alternate gene names: NA

Gene position: 822517-823269 (Clockwise)

Preceding gene: 110633103

Following gene: 110633105

Centisome position: 18.64

GC content: 61.09

Gene sequence:

>753_bases
ATGACTGTTGAGCATAATGGTGAAAGACGGCGTGTCTGGCTGCTGCTTGCCTTCAGTGTCCCCGTTCTGCTCATTCTGCT
CGCGCTCGGCACCTGGCAGGTCCAGCGTCTCCACTGGAAGGAGGATCTGCTTGCCCGGATCGATGAGCGCATCGCTTCTG
AGCCGGTGCCGCTCGACGAAATTTCCAGCGTTTATGAGCGGGGAGGGGATGTCGATTACCGCCCGGTCGTTCTTTCGGGC
ACATTCCTGCATGAGCGCGAGCGCCATTATCTTGCCACCTGGGAGGGCCAGTCCGGCTTCTTCGTGCACACCCCTCTTCG
GCTCGGGAACGGCAGGTATATTTTTGTCAATCGCGGCTTCGTACCCTATGACCGCAAAGACCCCGCGGTGCGGCAGCAGG
GGCAGGTGGGAGGCGAGATCGCGATCGTCGGGCTGGCGCGCGCCGCGCCGGCGCAAAAACCTTCTTTCCTGGTTCCCGAC
AATGATCTGGCCAAGAACATCTTCTATTGGAAGGATCTCGGCGCGATGACCGCTTCGGCGGGGCTCGACGCGTCGGAAAC
CTATCCCTTTTATGTGGATGCCGGCGACGCTCCCAATCCCGGCGGCTTGCCCGTGGGCGGTGTCACCCTCATAAACCTGC
CCAACAACCACCTGCAATATGCGCTCACCTGGTACGGGCTGGCATTTGCTTTGGTATGCGTTTTGGTGGTCTGGTTCCGC
CGCGGGCGGAACGGGGGTCGCGAACAGGCTTGA

Upstream 100 bases:

>100_bases
GAAGAGCTTTGAATGCAAAGGGGGCGGCCGCTGGGAAGGCGGCTGCCCCTTGCTTTTTGGAATACCGCAATAGGGCGGAA
AGAGTGCTTGGACCGGCCGA

Downstream 100 bases:

>100_bases
CAGGGAATGCCGGCCACTCCCACTTACCGGCGGTGAAACAGAGGCATCGAATGAGCGCGGACAAGCAGAAATTGACGATA
AGGCTGTGCGGCCCGCGTGG

Product: Surfeit locus 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTVEHNGERRRVWLLLAFSVPVLLILLALGTWQVQRLHWKEDLLARIDERIASEPVPLDEISSVYERGGDVDYRPVVLSG
TFLHERERHYLATWEGQSGFFVHTPLRLGNGRYIFVNRGFVPYDRKDPAVRQQGQVGGEIAIVGLARAAPAQKPSFLVPD
NDLAKNIFYWKDLGAMTASAGLDASETYPFYVDAGDAPNPGGLPVGGVTLINLPNNHLQYALTWYGLAFALVCVLVVWFR
RGRNGGREQA

Sequences:

>Translated_250_residues
MTVEHNGERRRVWLLLAFSVPVLLILLALGTWQVQRLHWKEDLLARIDERIASEPVPLDEISSVYERGGDVDYRPVVLSG
TFLHERERHYLATWEGQSGFFVHTPLRLGNGRYIFVNRGFVPYDRKDPAVRQQGQVGGEIAIVGLARAAPAQKPSFLVPD
NDLAKNIFYWKDLGAMTASAGLDASETYPFYVDAGDAPNPGGLPVGGVTLINLPNNHLQYALTWYGLAFALVCVLVVWFR
RGRNGGREQA
>Mature_249_residues
TVEHNGERRRVWLLLAFSVPVLLILLALGTWQVQRLHWKEDLLARIDERIASEPVPLDEISSVYERGGDVDYRPVVLSGT
FLHERERHYLATWEGQSGFFVHTPLRLGNGRYIFVNRGFVPYDRKDPAVRQQGQVGGEIAIVGLARAAPAQKPSFLVPDN
DLAKNIFYWKDLGAMTASAGLDASETYPFYVDAGDAPNPGGLPVGGVTLINLPNNHLQYALTWYGLAFALVCVLVVWFRR
GRNGGREQA

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=250, Percent_Identity=35.6, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17553856, Length=249, Percent_Identity=31.3253012048193, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321550, Length=195, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17864366, Length=235, Percent_Identity=28.5106382978723, Blast_Score=100, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 27927; Mature: 27796

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEHNGERRRVWLLLAFSVPVLLILLALGTWQVQRLHWKEDLLARIDERIASEPVPLDE
CCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ISSVYERGGDVDYRPVVLSGTFLHERERHYLATWEGQSGFFVHTPLRLGNGRYIFVNRGF
HHHHHHCCCCCCCCEEEEECHHHHCCCCCEEEEEECCCCEEEECCEEECCCEEEEEECCC
VPYDRKDPAVRQQGQVGGEIAIVGLARAAPAQKPSFLVPDNDLAKNIFYWKDLGAMTASA
CCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCCEECCCCHHHHHHHEEHHHCHHHHHC
GLDASETYPFYVDAGDAPNPGGLPVGGVTLINLPNNHLQYALTWYGLAFALVCVLVVWFR
CCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RGRNGGREQA
HCCCCCCCCC
>Mature Secondary Structure 
TVEHNGERRRVWLLLAFSVPVLLILLALGTWQVQRLHWKEDLLARIDERIASEPVPLDE
CCCCCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ISSVYERGGDVDYRPVVLSGTFLHERERHYLATWEGQSGFFVHTPLRLGNGRYIFVNRGF
HHHHHHCCCCCCCCEEEEECHHHHCCCCCEEEEEECCCCEEEECCEEECCCEEEEEECCC
VPYDRKDPAVRQQGQVGGEIAIVGLARAAPAQKPSFLVPDNDLAKNIFYWKDLGAMTASA
CCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCCCEECCCCHHHHHHHEEHHHCHHHHHC
GLDASETYPFYVDAGDAPNPGGLPVGGVTLINLPNNHLQYALTWYGLAFALVCVLVVWFR
CCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RGRNGGREQA
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]