| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is ctaE [H]
Identifier: 110633103
GI number: 110633103
Start: 821535
End: 822416
Strand: Direct
Name: ctaE [H]
Synonym: Meso_0746
Alternate gene names: 110633103
Gene position: 821535-822416 (Clockwise)
Preceding gene: 110633102
Following gene: 110633104
Centisome position: 18.62
GC content: 59.75
Gene sequence:
>882_bases ATGGCAGACGCCCACGCAAAAAAACACGATTACCACATCATCGATCCGAGCCCCTGGCCATTCATCGCCTCCGTCGGCGC GCTAGTCATGGCGCTGGGTGCCATCGCGTGGATGAAAGCGGCACAGGGCAGCTCGTTCCCGGTCTTCGGGATCGACCTTG CGGCATCAAGGTTCTGGCTGTTCCTGATCGGCCTCCTGATCATCCTCTACACCATGTTCTCGTGGTGGAGCGACACGATC AGGGAAGGGCAGGAAGGGCATCATACGGCTGTCGTATCGCTTCATCTGCGCTACGGCATGATCATGTTCATCGCCTCCGA GCTTATGTTCTTCGTGGCGTGGTTCTGGGCGTTTTTCGATGCAAGCCTCTTCCCTGGCGATCCATCTCAGGTAAGCCGCG CGGAGTTCACGGGCGGAACCTGGCCGCCGCACGGGGTGGAAGTGCTCGATCCTTTCCACCTGCCGCTTTACAACACGATC ATCCTGCTGCTGTCGGGCACGACGGTCACCTGGGCGCACCATGCGTTGCTTGAGAACGACCGCAAGGGGCTCGTGGCCGG GCTTGCCGTCACCGTGGCGCTTGGCATCCTCTTCAGCTTCGTGCAGGCCTATGAATATATGCACGCGCCGTTTGCCTTCA GCGATTCCATCTATGGCGCTACCTTCTTCATGGCGACCGGCTTCCATGGTTTCCACGTGATCGTCGGCACCATCTTCCTT GCCGTCTGCCTTCTTCGGGCCATGGCGGGGCAGTTTACGCCGAAGCAGCACTTTGGTTTCGAGGCTGCGGCCTGGTATTG GCACTTCGTCGACGTGGTCTGGCTGTTCCTCTTCGCCTTCATCTATGTCTGGGCGTCGGCGGGTGCCACAATCGCGCATT AG
Upstream 100 bases:
>100_bases AAGACCATCACGCTTTCCTACACCTTCTACCCGAATAATCAGGAGTCGGCGGAAGGGCCGGCTGAAGGTGCGGCAAAGAC CCAGAAGCTCGGGGGATAAA
Downstream 100 bases:
>100_bases GAAGAGCTTTGAATGCAAAGGGGGCGGCCGCTGGGAAGGCGGCTGCCCCTTGCTTTTTGGAATACCGCAATAGGGCGGAA AGAGTGCTTGGACCGGCCGA
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MADAHAKKHDYHIIDPSPWPFIASVGALVMALGAIAWMKAAQGSSFPVFGIDLAASRFWLFLIGLLIILYTMFSWWSDTI REGQEGHHTAVVSLHLRYGMIMFIASELMFFVAWFWAFFDASLFPGDPSQVSRAEFTGGTWPPHGVEVLDPFHLPLYNTI ILLLSGTTVTWAHHALLENDRKGLVAGLAVTVALGILFSFVQAYEYMHAPFAFSDSIYGATFFMATGFHGFHVIVGTIFL AVCLLRAMAGQFTPKQHFGFEAAAWYWHFVDVVWLFLFAFIYVWASAGATIAH
Sequences:
>Translated_293_residues MADAHAKKHDYHIIDPSPWPFIASVGALVMALGAIAWMKAAQGSSFPVFGIDLAASRFWLFLIGLLIILYTMFSWWSDTI REGQEGHHTAVVSLHLRYGMIMFIASELMFFVAWFWAFFDASLFPGDPSQVSRAEFTGGTWPPHGVEVLDPFHLPLYNTI ILLLSGTTVTWAHHALLENDRKGLVAGLAVTVALGILFSFVQAYEYMHAPFAFSDSIYGATFFMATGFHGFHVIVGTIFL AVCLLRAMAGQFTPKQHFGFEAAAWYWHFVDVVWLFLFAFIYVWASAGATIAH >Mature_292_residues ADAHAKKHDYHIIDPSPWPFIASVGALVMALGAIAWMKAAQGSSFPVFGIDLAASRFWLFLIGLLIILYTMFSWWSDTIR EGQEGHHTAVVSLHLRYGMIMFIASELMFFVAWFWAFFDASLFPGDPSQVSRAEFTGGTWPPHGVEVLDPFHLPLYNTII LLLSGTTVTWAHHALLENDRKGLVAGLAVTVALGILFSFVQAYEYMHAPFAFSDSIYGATFFMATGFHGFHVIVGTIFLA VCLLRAMAGQFTPKQHFGFEAAAWYWHFVDVVWLFLFAFIYVWASAGATIAH
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=281, Percent_Identity=47.3309608540925, Blast_Score=241, Evalue=6e-64, Organism=Escherichia coli, GI1786633, Length=139, Percent_Identity=30.9352517985612, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6226542, Length=286, Percent_Identity=33.5664335664336, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32713; Mature: 32582
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAHAKKHDYHIIDPSPWPFIASVGALVMALGAIAWMKAAQGSSFPVFGIDLAASRFWL CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH FLIGLLIILYTMFSWWSDTIREGQEGHHTAVVSLHLRYGMIMFIASELMFFVAWFWAFFD HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC ASLFPGDPSQVSRAEFTGGTWPPHGVEVLDPFHLPLYNTIILLLSGTTVTWAHHALLEND CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC RKGLVAGLAVTVALGILFSFVQAYEYMHAPFAFSDSIYGATFFMATGFHGFHVIVGTIFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH AVCLLRAMAGQFTPKQHFGFEAAAWYWHFVDVVWLFLFAFIYVWASAGATIAH HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADAHAKKHDYHIIDPSPWPFIASVGALVMALGAIAWMKAAQGSSFPVFGIDLAASRFWL CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH FLIGLLIILYTMFSWWSDTIREGQEGHHTAVVSLHLRYGMIMFIASELMFFVAWFWAFFD HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC ASLFPGDPSQVSRAEFTGGTWPPHGVEVLDPFHLPLYNTIILLLSGTTVTWAHHALLEND CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC RKGLVAGLAVTVALGILFSFVQAYEYMHAPFAFSDSIYGATFFMATGFHGFHVIVGTIFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH AVCLLRAMAGQFTPKQHFGFEAAAWYWHFVDVVWLFLFAFIYVWASAGATIAH HHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]